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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3404510 |
| Transcript ID | Lj1g3v3404510.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: polyol transporter 5-like [Cicer arietinum] gi|502130938|ref|XP_004500821.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | – | – | |
| PANTHER | 1 | 139 | 139 | 1.60E-69 | – | |
| ProSiteProfiles | 1 | 119 | 119 | 13.76 | ||
| Phobius | 1 | 1 | 1 | – | – | |
| PANTHER | 1 | 139 | 139 | 1.60E-69 | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Gene3D | 3 | 125 | 123 | 2.60E-07 | – | |
| SUPERFAMILY | 6 | 127 | 122 | 2.49E-12 | ||
| Pfam | 7 | 128 | 122 | 2.30E-24 | ||
| Phobius | 14 | 18 | 5 | – | – | |
| Phobius | 19 | 33 | 15 | – | – | |
| TMHMM | 30 | 52 | 23 | – | – | |
| PRINTS | 31 | 52 | 22 | 8.90E-08 | ||
| Phobius | 34 | 53 | 20 | – | – | |
| Phobius | 54 | 64 | 11 | – | – | |
| PRINTS | 54 | 66 | 13 | 8.90E-08 | ||
| Phobius | 65 | 85 | 21 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 86 | 90 | 5 | – | – | |
| Phobius | 91 | 115 | 25 | – | – | |
| TMHMM | 91 | 113 | 23 | – | – | |
| Phobius | 116 | 154 | 39 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3404510.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3404510.1, powered by CORGI.
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