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Lj1g3v3443690.1

Overview

Field Value
Gene ID Lj1g3v3443690
Transcript ID Lj1g3v3443690.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: BEL1-like homeodomain protein 9-like [Glycine max] gi|356566587|ref|XP_003551512.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11850
196 602 407 6.20E-193 –
PANTHER
PTHR11850:SF82
196 602 407 6.20E-193 –
SMART
SM00574
211 342 132 4.60E-43
IPR006563
Pfam
PF07526
216 341 126 5.60E-37
IPR006563
MobiDBLite
mobidb-lite
357 377 21 – –
ProSiteProfiles
PS50071
385 448 64 11.629
IPR001356
CDD
cd00086
388 449 62 6.43E-12 –
SMART
SM00389
388 452 65 6.20E-10
IPR001356
SUPERFAMILY
SSF46689
390 455 66 3.51E-16
IPR009057
Gene3D
G3DSA:1.10.10.60
391 452 62 1.90E-25
IPR009057
Pfam
PF05920
405 444 40 7.50E-16
IPR008422
MobiDBLite
mobidb-lite
457 504 48 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Genome browser

LORE1 insertions 13

Expression data

Expression pattern

Expression pattern of Lj1g3v3443690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v3443690.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.