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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006563
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 42 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.731s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0034399.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Cicer arietinum] gi|502122254|ref|XP_004497655.1| chr0 10889839 10892726 +
3 domain predictions
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Lj0g3v0057839.1
n.a. BEL1-like homeodomain protein [Medicago truncatula] gi|357438117|ref|XP_003589334.1| chr0 19000164 19004860 -
3 domain predictions
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Lj0g3v0086419.1
n.a. PREDICTED: homeobox protein ATH1-like isoform X1 [Cicer arietinum] gi|502125406|ref|XP_004498911.1| chr0 34899267 34904701 +
3 domain predictions
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Lj0g3v0250849.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356534548|ref|XP_003535815.1| chr0 130022021 130026262 -
3 domain predictions
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Lj0g3v0269339.1
n.a. PREDICTED: BEL1-like homeodomain protein 8-like [Fragaria vesca subsp]. vesca] gi|470110764|ref|XP_004291636.1| chr0 139523669 139528962 +
3 domain predictions
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Lj1g3v1785910.1
n.a. PREDICTED: homeobox protein ATH1-like [Glycine max] gi|356514601|ref|XP_003525994.1| chr1 20895459 20899917 -
3 domain predictions
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Lj1g3v2740220.1
n.a. BEL1-like homeodomain protein [Medicago truncatula] gi|357438117|ref|XP_003589334.1| chr1 31488416 31491539 +
3 domain predictions
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Lj1g3v3443690.1
n.a. PREDICTED: BEL1-like homeodomain protein 9-like [Glycine max] gi|356566587|ref|XP_003551512.1| chr1 39774502 39779523 +
3 domain predictions
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Lj1g3v4752480.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356505435|ref|XP_003521496.1| chr1 56710030 56715333 +
3 domain predictions
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Lj2g3v1828460.1
n.a. PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max] gi|356540714|ref|XP_003538830.1| chr2 27455758 27462907 +
3 domain predictions
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Lj2g3v2039960.1
n.a. POX family protein isoform 1 [Theobroma cacao] gi|508777567|gb|EOY24823.1| chr2 31044816 31049387 +
3 domain predictions
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Lj3g3v1272300.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356550076|ref|XP_003543416.1| chr3 16375822 16380640 +
3 domain predictions
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Lj3g3v2938490.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356544766|ref|XP_003540818.1| chr3 36648102 36653633 -
3 domain predictions
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Lj3g3v3082350.1
n.a. PREDICTED: BEL1-like homeodomain protein 8-like isoform X1 [Cicer arietinum] gi|502145470|ref|XP_004506043.1| chr3 38504079 38509853 +
3 domain predictions
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Lj4g3v0911380.1
n.a. PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max] gi|356502201|ref|XP_003519909.1| chr4 13532025 13541436 -
3 domain predictions
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Lj4g3v2976870.1
n.a. POX family protein isoform 1 [Theobroma cacao] gi|508777567|gb|EOY24823.1| chr4 39393965 39399137 +
3 domain predictions
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Lj4g3v2976880.1
n.a. POX family protein isoform 1 [Theobroma cacao] gi|508777567|gb|EOY24823.1| chr4 39394813 39398033 +
3 domain predictions
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Lj5g3v2238710.1
n.a. PREDICTED: BEL1-like homeodomain protein 10-like [Glycine max] gi|356551876|ref|XP_003544298.1| chr5 32133218 32137738 +
3 domain predictions
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Lj5g3v2238720.1
n.a. PREDICTED: BEL1-like homeodomain protein 11-like [Glycine max] gi|356509666|ref|XP_003523567.1| chr5 32140782 32143646 +
3 domain predictions
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LotjaGi1g1v0366700_LC.1
n.a. Homeobox protein ATH1; TAIR: AT4G32980.1 homeobox protein ATH1; Swiss-Prot: sp|P48731|ATH1_ARATH Homeobox protein ATH1; TrEMBL-Plants: tr|A0A0B2RIS6|A0A0B2RIS6_GLYSO Homeobox protein ATH1; Found in the gene: LotjaGi1g1v0366700_LC LjG1.1_chr1 84440455 84441552 -
2 domain predictions
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LotjaGi1g1v0422900.1
n.a. BEL1-like homeodomain protein; TAIR: AT1G75430.1 BEL1-like homeodomain 11; Swiss-Prot: sp|Q1PFD1|BLH11_ARATH BEL1-like homeodomain protein 11; TrEMBL-Plants: tr|A0A1J7GB71|A0A1J7GB71_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0422900 LjG1.1_chr1 91696290 91699180 -
3 domain predictions
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LotjaGi1g1v0423000.1
n.a. Homeobox protein BEL1 homolog; TAIR: AT1G75410.1 BEL1-like homeodomain 3; Swiss-Prot: sp|Q9FWS9|BLH3_ARATH BEL1-like homeodomain protein 3; TrEMBL-Plants: tr|A0A151TC66|A0A151TC66_CAJCA BEL1-like homeodomain protein 7; Found in the gene: LotjaGi1g1v0423000 LjG1.1_chr1 91701800 91706986 -
3 domain predictions
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LotjaGi1g1v0577800.1
n.a. BEL1-like homeodomain protein; TAIR: AT5G02030.1 POX (plant homeobox) family protein; Swiss-Prot: sp|Q9LZM8|BLH9_ARATH BEL1-like homeodomain protein 9; TrEMBL-Plants: tr|V7B4E5|V7B4E5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0577800 LjG1.1_chr1 111737178 111742410 +
3 domain predictions
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LotjaGi1g1v0737400.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7D1A0|V7D1A0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0737400 LjG1.1_chr1 131190348 131196411 +
3 domain predictions
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LotjaGi2g1v0395600.1
n.a. Homeobox protein bel1-like protein; TAIR: AT4G36870.1 BEL1-like homeodomain 2; Swiss-Prot: sp|Q9SW80|BLH2_ARATH BEL1-like homeodomain protein 2; TrEMBL-Plants: tr|A0A0B2SBB1|A0A0B2SBB1_GLYSO BEL1-like homeodomain protein 2; Found in the gene: LotjaGi2g1v0395600 LjG1.1_chr2 89300208 89307890 +
3 domain predictions
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LotjaGi2g1v0395600.2
n.a. Homeobox protein BEL1 like; TAIR: AT4G36870.1 BEL1-like homeodomain 2; Swiss-Prot: sp|Q9SW80|BLH2_ARATH BEL1-like homeodomain protein 2; TrEMBL-Plants: tr|A0A151TI19|A0A151TI19_CAJCA BEL1-like homeodomain protein 4; Found in the gene: LotjaGi2g1v0395600 LjG1.1_chr2 89300220 89307535 +
3 domain predictions
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LotjaGi2g1v0395600.3
n.a. Homeobox protein bel1-like protein; TAIR: AT4G36870.1 BEL1-like homeodomain 2; Swiss-Prot: sp|Q9SW80|BLH2_ARATH BEL1-like homeodomain protein 2; TrEMBL-Plants: tr|A0A0B2SBB1|A0A0B2SBB1_GLYSO BEL1-like homeodomain protein 2; Found in the gene: LotjaGi2g1v0395600 LjG1.1_chr2 89300246 89307747 +
3 domain predictions
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LotjaGi2g1v0435500.1
n.a. Homeobox protein BEL1 like; TAIR: AT5G41410.1 POX (plant homeobox) family protein; Swiss-Prot: sp|Q38897|BEL1_ARATH Homeobox protein BEL1 homolog; TrEMBL-Plants: tr|V7CMC5|V7CMC5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0435500 LjG1.1_chr2 93204980 93209629 +
3 domain predictions
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LotjaGi3g1v0165700.1
n.a. BEL1-like homeodomain protein; TAIR: AT2G27990.1 BEL1-like homeodomain 8; Swiss-Prot: sp|Q9SJJ3|BLH8_ARATH BEL1-like homeodomain protein 8; TrEMBL-Plants: tr|V7BZW7|V7BZW7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0165700 LjG1.1_chr3 22566826 22573082 -
3 domain predictions
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LotjaGi3g1v0182700.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7BZE7|V7BZE7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0182700 LjG1.1_chr3 25598758 25604824 +
3 domain predictions
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LotjaGi3g1v0182700.2
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7BZE7|V7BZE7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0182700 LjG1.1_chr3 25598840 25604914 +
3 domain predictions
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LotjaGi3g1v0182700.3
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7BZE7|V7BZE7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0182700 LjG1.1_chr3 25598857 25604752 +
3 domain predictions
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LotjaGi3g1v0471600.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|A0A1J7H6D7|A0A1J7H6D7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0471600 LjG1.1_chr3 88782855 88789093 -
3 domain predictions
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LotjaGi3g1v0471600.2
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|A0A1J7H6D7|A0A1J7H6D7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0471600 LjG1.1_chr3 88782872 88789063 -
3 domain predictions
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LotjaGi3g1v0471600.3
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|A0A1J7H6D7|A0A1J7H6D7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0471600 LjG1.1_chr3 88782963 88789126 -
3 domain predictions
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LotjaGi3g1v0488700.1
n.a. BEL1-like homeodomain protein; TAIR: AT2G27990.1 BEL1-like homeodomain 8; Swiss-Prot: sp|Q9SJJ3|BLH8_ARATH BEL1-like homeodomain protein 8; TrEMBL-Plants: tr|V7AFC3|V7AFC3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0488700 LjG1.1_chr3 90654699 90660708 +
3 domain predictions
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LotjaGi4g1v0114000.1
n.a. Homeobox protein bel1-like protein; TAIR: AT2G23760.1 BEL1-like homeodomain 4; Swiss-Prot: sp|Q94KL5|BLH4_ARATH BEL1-like homeodomain protein 4; TrEMBL-Plants: tr|G7LFL6|G7LFL6_MEDTR BEL1-related homeotic protein; Found in the gene: LotjaGi4g1v0114000 LjG1.1_chr4 16460038 16469846 -
3 domain predictions
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LotjaGi4g1v0429300.1
n.a. Homeobox protein BEL1 like; TAIR: AT5G41410.1 POX (plant homeobox) family protein; Swiss-Prot: sp|Q38897|BEL1_ARATH Homeobox protein BEL1 homolog; TrEMBL-Plants: tr|B9GKE5|B9GKE5_POPTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0429300 LjG1.1_chr4 80348347 80352647 +
3 domain predictions
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LotjaGi5g1v0011700.1
n.a. Homeobox protein BEL1 homolog; TAIR: AT1G75410.1 BEL1-like homeodomain 3; Swiss-Prot: sp|Q9FWS9|BLH3_ARATH BEL1-like homeodomain protein 3; TrEMBL-Plants: tr|G7I5U5|G7I5U5_MEDTR BEL1-related homeotic protein; Found in the gene: LotjaGi5g1v0011700 LjG1.1_chr5 2626804 2631827 +
3 domain predictions
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LotjaGi5g1v0011700.2
n.a. Homeobox protein BEL1 homolog; TAIR: AT1G75410.1 BEL1-like homeodomain 3; Swiss-Prot: sp|Q9FWS9|BLH3_ARATH BEL1-like homeodomain protein 3; TrEMBL-Plants: tr|G7I5U5|G7I5U5_MEDTR BEL1-related homeotic protein; Found in the gene: LotjaGi5g1v0011700 LjG1.1_chr5 2626819 2631546 +
3 domain predictions
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LotjaGi5g1v0040700.1
n.a. BEL1-like homeodomain protein; TAIR: AT4G32980.1 homeobox protein ATH1; Swiss-Prot: sp|P48731|ATH1_ARATH Homeobox protein ATH1; TrEMBL-Plants: tr|V7CUC5|V7CUC5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0040700 LjG1.1_chr5 6845945 6851537 -
3 domain predictions
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LotjaGi5g1v0105400.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|I1L9K6|I1L9K6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0105400 LjG1.1_chr5 19778647 19785792 +
3 domain predictions
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