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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008422
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 67 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.872s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0057839.1
n.a. BEL1-like homeodomain protein [Medicago truncatula] gi|357438117|ref|XP_003589334.1| chr0 19000164 19004860 -
2 domain predictions
2 GO terms
Lj0g3v0083039.1
n.a. homeobox protein knotted-1-like 2-like [Glycine max] gi|388556558|ref|NP_001253999.1| chr0 32735870 32741850 -
2 domain predictions
2 GO terms
Lj0g3v0086419.1
n.a. PREDICTED: homeobox protein ATH1-like isoform X1 [Cicer arietinum] gi|502125406|ref|XP_004498911.1| chr0 34899267 34904701 +
2 domain predictions
2 GO terms
Lj0g3v0183889.1
n.a. PREDICTED: homeobox protein knotted-1-like 1-like isoform 1 [Glycine max] gi|356535014|ref|XP_003536044.1| chr0 89359129 89365195 +
2 domain predictions
2 GO terms
Lj0g3v0250839.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like isoform 1 [Glycine max] gi|356500591|ref|XP_003519115.1| chr0 130021310 130026142 -
2 domain predictions
2 GO terms
Lj0g3v0250849.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356534548|ref|XP_003535815.1| chr0 130022021 130026262 -
2 domain predictions
2 GO terms
Lj0g3v0268639.1
n.a. PREDICTED: homeobox protein knotted-1-like LET12-like isoform X2 [Cicer arietinum] gi|502167120|ref|XP_004514061.1| chr0 139094554 139101624 +
2 domain predictions
2 GO terms
Lj0g3v0268639.2
n.a. PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max] gi|356562896|ref|XP_003549704.1| chr0 139094554 139101624 +
2 domain predictions
2 GO terms
Lj0g3v0269339.1
n.a. PREDICTED: BEL1-like homeodomain protein 8-like [Fragaria vesca subsp]. vesca] gi|470110764|ref|XP_004291636.1| chr0 139523669 139528962 +
2 domain predictions
2 GO terms
Lj1g3v1853300.1
n.a. PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max] gi|356507510|ref|XP_003522507.1| chr1 22414816 22418331 -
2 domain predictions
2 GO terms
Lj1g3v2740220.1
n.a. BEL1-like homeodomain protein [Medicago truncatula] gi|357438117|ref|XP_003589334.1| chr1 31488416 31491539 +
2 domain predictions
2 GO terms
Lj1g3v3443690.1
n.a. PREDICTED: BEL1-like homeodomain protein 9-like [Glycine max] gi|356566587|ref|XP_003551512.1| chr1 39774502 39779523 +
2 domain predictions
2 GO terms
Lj1g3v4752480.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356505435|ref|XP_003521496.1| chr1 56710030 56715333 +
2 domain predictions
2 GO terms
Lj2g3v1415210.1
n.a. Knotted-1 homeobox protein [Caragana korshinskii] gi|480328047|gb|AGJ83725.1| chr2 22341905 22348536 +
2 domain predictions
2 GO terms
Lj2g3v1828460.1
n.a. PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max] gi|356540714|ref|XP_003538830.1| chr2 27455758 27462907 +
2 domain predictions
2 GO terms
Lj2g3v2003070.1
n.a. PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max] gi|356495645|ref|XP_003516685.1| chr2 30618377 30623966 +
2 domain predictions
2 GO terms
Lj2g3v2039960.1
n.a. POX family protein isoform 1 [Theobroma cacao] gi|508777567|gb|EOY24823.1| chr2 31044816 31049387 +
2 domain predictions
2 GO terms
Lj2g3v2900220.1
n.a. PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max] gi|356554468|ref|XP_003545568.1| chr2 37693798 37699050 -
2 domain predictions
2 GO terms
Lj3g3v2938490.1
n.a. PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356544766|ref|XP_003540818.1| chr3 36648102 36653633 -
2 domain predictions
2 GO terms
Lj3g3v3082350.1
n.a. PREDICTED: BEL1-like homeodomain protein 8-like isoform X1 [Cicer arietinum] gi|502145470|ref|XP_004506043.1| chr3 38504079 38509853 +
2 domain predictions
2 GO terms
Lj4g3v0133580.1
n.a. KNT1 [Glycine max] gi|351734506|ref|NP_001237352.1| chr4 1410523 1414730 +
2 domain predictions
2 GO terms
Lj4g3v0911380.1
n.a. PREDICTED: BEL1-like homeodomain protein 2-like [Glycine max] gi|356502201|ref|XP_003519909.1| chr4 13532025 13541436 -
2 domain predictions
2 GO terms
Lj4g3v2976880.1
n.a. POX family protein isoform 1 [Theobroma cacao] gi|508777567|gb|EOY24823.1| chr4 39394813 39398033 +
2 domain predictions
2 GO terms
Lj5g3v2238710.1
n.a. PREDICTED: BEL1-like homeodomain protein 10-like [Glycine max] gi|356551876|ref|XP_003544298.1| chr5 32133218 32137738 +
2 domain predictions
2 GO terms
Lj5g3v2238720.1
n.a. PREDICTED: BEL1-like homeodomain protein 11-like [Glycine max] gi|356509666|ref|XP_003523567.1| chr5 32140782 32143646 +
2 domain predictions
2 GO terms
Lj6g3v1088990.1
n.a. PREDICTED: homeobox protein knotted-1-like LET12-like isoform X1 [Cicer arietinum] gi|502167116|ref|XP_004514060.1| chr6 13173550 13177829 +
2 domain predictions
2 GO terms
Lj6g3v1812030.1
n.a. Knox class 1 protein [Pisum sativum] gi|3426304|gb|AAC32262.1| chr6 20192094 20197620 +
2 domain predictions
2 GO terms
LotjaGi1g1v0065200.1
n.a. Homeobox protein knotted-1, putative; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|V7B6U2|V7B6U2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 LjG1.1_chr1 9011829 9017015 +
2 domain predictions
2 GO terms
LotjaGi1g1v0065200.2
n.a. Homeobox protein knotted-1, putative; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|A0A0S3RK69|A0A0S3RK69_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 LjG1.1_chr1 9011888 9017043 +
2 domain predictions
2 GO terms
LotjaGi1g1v0065200.3
n.a. Homeobox protein; TAIR: AT1G62360.1 KNOX/ELK homeobox transcription factor; Swiss-Prot: sp|P46608|HSBH1_SOYBN Homeobox protein SBH1; TrEMBL-Plants: tr|K7KB19|K7KB19_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065200 LjG1.1_chr1 9012585 9016691 +
2 domain predictions
2 GO terms
LotjaGi1g1v0380300.1
n.a. Homeobox protein knotted-1, putative; TAIR: AT5G25220.2 homeobox protein knotted-1-like 3; Swiss-Prot: sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3; TrEMBL-Plants: tr|V7ATS5|V7ATS5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0380300 LjG1.1_chr1 86191427 86195512 +
2 domain predictions
2 GO terms
LotjaGi1g1v0422900.1
n.a. BEL1-like homeodomain protein; TAIR: AT1G75430.1 BEL1-like homeodomain 11; Swiss-Prot: sp|Q1PFD1|BLH11_ARATH BEL1-like homeodomain protein 11; TrEMBL-Plants: tr|A0A1J7GB71|A0A1J7GB71_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0422900 LjG1.1_chr1 91696290 91699180 -
2 domain predictions
2 GO terms
LotjaGi1g1v0423000.1
n.a. Homeobox protein BEL1 homolog; TAIR: AT1G75410.1 BEL1-like homeodomain 3; Swiss-Prot: sp|Q9FWS9|BLH3_ARATH BEL1-like homeodomain protein 3; TrEMBL-Plants: tr|A0A151TC66|A0A151TC66_CAJCA BEL1-like homeodomain protein 7; Found in the gene: LotjaGi1g1v0423000 LjG1.1_chr1 91701800 91706986 -
2 domain predictions
2 GO terms
LotjaGi1g1v0577800.1
n.a. BEL1-like homeodomain protein; TAIR: AT5G02030.1 POX (plant homeobox) family protein; Swiss-Prot: sp|Q9LZM8|BLH9_ARATH BEL1-like homeodomain protein 9; TrEMBL-Plants: tr|V7B4E5|V7B4E5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0577800 LjG1.1_chr1 111737178 111742410 +
2 domain predictions
2 GO terms
LotjaGi1g1v0737400.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7D1A0|V7D1A0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0737400 LjG1.1_chr1 131190348 131196411 +
2 domain predictions
2 GO terms
LotjaGi2g1v0322900.1
n.a. homeobox 1; TAIR: AT1G23380.1 homeobox protein knotted-1-like 6; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|R9R650|R9R650_9FABA Knotted-1 homeobox protein; Found in the gene: LotjaGi2g1v0322900 LjG1.1_chr2 79803177 79810759 +
2 domain predictions
2 GO terms
LotjaGi2g1v0322900.2
n.a. homeobox 1; TAIR: AT1G23380.1 homeobox protein knotted-1-like 6; Swiss-Prot: sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6; TrEMBL-Plants: tr|G7K060|G7K060_MEDTR Homeobox knotted-like protein; Found in the gene: LotjaGi2g1v0322900 LjG1.1_chr2 79803743 79810376 +
2 domain predictions
2 GO terms
LotjaGi2g1v0395600.1
n.a. Homeobox protein bel1-like protein; TAIR: AT4G36870.1 BEL1-like homeodomain 2; Swiss-Prot: sp|Q9SW80|BLH2_ARATH BEL1-like homeodomain protein 2; TrEMBL-Plants: tr|A0A0B2SBB1|A0A0B2SBB1_GLYSO BEL1-like homeodomain protein 2; Found in the gene: LotjaGi2g1v0395600 LjG1.1_chr2 89300208 89307890 +
2 domain predictions
2 GO terms
LotjaGi2g1v0395600.2
n.a. Homeobox protein BEL1 like; TAIR: AT4G36870.1 BEL1-like homeodomain 2; Swiss-Prot: sp|Q9SW80|BLH2_ARATH BEL1-like homeodomain protein 2; TrEMBL-Plants: tr|A0A151TI19|A0A151TI19_CAJCA BEL1-like homeodomain protein 4; Found in the gene: LotjaGi2g1v0395600 LjG1.1_chr2 89300220 89307535 +
2 domain predictions
2 GO terms
LotjaGi2g1v0395600.3
n.a. Homeobox protein bel1-like protein; TAIR: AT4G36870.1 BEL1-like homeodomain 2; Swiss-Prot: sp|Q9SW80|BLH2_ARATH BEL1-like homeodomain protein 2; TrEMBL-Plants: tr|A0A0B2SBB1|A0A0B2SBB1_GLYSO BEL1-like homeodomain protein 2; Found in the gene: LotjaGi2g1v0395600 LjG1.1_chr2 89300246 89307747 +
2 domain predictions
2 GO terms
LotjaGi2g1v0430100.1
n.a. Homeobox protein knotted-1, putative; TAIR: AT1G62990.1 homeobox knotted-like protein; Swiss-Prot: sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7; TrEMBL-Plants: tr|A0A0L9UPV4|A0A0L9UPV4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0430100 LjG1.1_chr2 92713610 92720111 +
2 domain predictions
2 GO terms
LotjaGi2g1v0430100.2
n.a. Homeobox protein knotted-1, putative; TAIR: AT1G62990.1 homeobox knotted-like protein; Swiss-Prot: sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7; TrEMBL-Plants: tr|A0A0L9UPV4|A0A0L9UPV4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0430100 LjG1.1_chr2 92714200 92718781 +
2 domain predictions
2 GO terms
LotjaGi2g1v0435500.1
n.a. Homeobox protein BEL1 like; TAIR: AT5G41410.1 POX (plant homeobox) family protein; Swiss-Prot: sp|Q38897|BEL1_ARATH Homeobox protein BEL1 homolog; TrEMBL-Plants: tr|V7CMC5|V7CMC5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0435500 LjG1.1_chr2 93204980 93209629 +
2 domain predictions
2 GO terms
LotjaGi3g1v0165700.1
n.a. BEL1-like homeodomain protein; TAIR: AT2G27990.1 BEL1-like homeodomain 8; Swiss-Prot: sp|Q9SJJ3|BLH8_ARATH BEL1-like homeodomain protein 8; TrEMBL-Plants: tr|V7BZW7|V7BZW7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0165700 LjG1.1_chr3 22566826 22573082 -
2 domain predictions
2 GO terms
LotjaGi3g1v0182700.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7BZE7|V7BZE7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0182700 LjG1.1_chr3 25598758 25604824 +
2 domain predictions
2 GO terms
LotjaGi3g1v0182700.2
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7BZE7|V7BZE7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0182700 LjG1.1_chr3 25598840 25604914 +
2 domain predictions
2 GO terms
LotjaGi3g1v0182700.3
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7BZE7|V7BZE7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0182700 LjG1.1_chr3 25598857 25604752 +
2 domain predictions
2 GO terms
LotjaGi3g1v0471600.1
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|A0A1J7H6D7|A0A1J7H6D7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0471600 LjG1.1_chr3 88782855 88789093 -
2 domain predictions
2 GO terms
LotjaGi3g1v0471600.2
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|A0A1J7H6D7|A0A1J7H6D7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0471600 LjG1.1_chr3 88782872 88789063 -
2 domain predictions
2 GO terms
LotjaGi3g1v0471600.3
n.a. BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|A0A1J7H6D7|A0A1J7H6D7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0471600 LjG1.1_chr3 88782963 88789126 -
2 domain predictions
2 GO terms