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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3443730 |
| Transcript ID | Lj1g3v3443730.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g28470-like [Glycine max] gi|356566575|ref|XP_003551506.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 539 | 539 | 0 | ||
| PANTHER | 1 | 539 | 539 | 0 | – | |
| SUPERFAMILY | 2 | 198 | 197 | 2.62E-19 | ||
| Gene3D | 4 | 188 | 185 | 4.80E-05 | – | |
| TMHMM | 25 | 47 | 23 | – | – | |
| Phobius | 28 | 48 | 21 | – | – | |
| Phobius | 49 | 54 | 6 | – | – | |
| Pfam | 51 | 485 | 435 | 4.30E-69 | ||
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 55 | 77 | 23 | – | – | |
| Phobius | 78 | 96 | 19 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 97 | 120 | 24 | – | – | |
| Phobius | 121 | 140 | 20 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 141 | 161 | 21 | – | – | |
| Phobius | 162 | 166 | 5 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 167 | 188 | 22 | – | – | |
| Phobius | 189 | 290 | 102 | – | – | |
| SUPERFAMILY | 278 | 522 | 245 | 2.62E-19 | ||
| TMHMM | 288 | 310 | 23 | – | – | |
| Phobius | 291 | 310 | 20 | – | – | |
| Phobius | 311 | 329 | 19 | – | – | |
| TMHMM | 330 | 352 | 23 | – | – | |
| Phobius | 330 | 351 | 22 | – | – | |
| Phobius | 352 | 371 | 20 | – | – | |
| Gene3D | 370 | 522 | 153 | 4.00E-04 | – | |
| Phobius | 372 | 393 | 22 | – | – | |
| TMHMM | 373 | 395 | 23 | – | – | |
| Phobius | 394 | 412 | 19 | – | – | |
| TMHMM | 410 | 432 | 23 | – | – | |
| Phobius | 413 | 432 | 20 | – | – | |
| Phobius | 433 | 452 | 20 | – | – | |
| Phobius | 453 | 477 | 25 | – | – | |
| TMHMM | 453 | 475 | 23 | – | – | |
| Phobius | 478 | 496 | 19 | – | – | |
| TMHMM | 495 | 517 | 23 | – | – | |
| Phobius | 497 | 517 | 21 | – | – | |
| Phobius | 518 | 543 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3443730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3443730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.