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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3443790 |
| Transcript ID | Lj1g3v3443790.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp]. lyrata] gi|297810303|ref|XP_002873035.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 257 | 257 | 3.40E-132 | – | |
| PANTHER | 1 | 257 | 257 | 3.40E-132 | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 27 | 6 | – | – | |
| Phobius | 28 | 257 | 230 | – | – | |
| Gene3D | 64 | 257 | 194 | 3.00E-47 | ||
| SUPERFAMILY | 64 | 256 | 193 | 5.89E-48 | ||
| Pfam | 75 | 255 | 181 | 2.40E-46 | ||
| MobiDBLite | 130 | 151 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Mitochondrial matrix | The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation. |
Expression pattern of Lj1g3v3443790.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3443790.1, powered by CORGI.
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