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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3835580 |
| Transcript ID | Lj1g3v3835580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Major facilitator superfamily protein isoform 1 [Theobroma cacao] gi|508710932|gb|EOY02829.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 1 | 585 | 585 | 0 | – | |
| PANTHER | 1 | 585 | 585 | 0 | – | |
| SUPERFAMILY | 7 | 201 | 195 | 3.92E-10 | ||
| Gene3D | 14 | 205 | 192 | 1.10E-09 | – | |
| Pfam | 15 | 262 | 248 | 8.80E-90 | ||
| Phobius | 16 | 36 | 21 | – | – | |
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 37 | 78 | 42 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 79 | 102 | 24 | – | – | |
| TMHMM | 97 | 119 | 23 | – | – | |
| Phobius | 103 | 107 | 5 | – | – | |
| Phobius | 108 | 127 | 20 | – | – | |
| Phobius | 128 | 147 | 20 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 148 | 168 | 21 | – | – | |
| Phobius | 169 | 173 | 5 | – | – | |
| Phobius | 174 | 194 | 21 | – | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 195 | 213 | 19 | – | – | |
| TMHMM | 212 | 231 | 20 | – | – | |
| SUPERFAMILY | 213 | 275 | 63 | 8.63E-20 | ||
| Phobius | 214 | 236 | 23 | – | – | |
| Phobius | 237 | 241 | 5 | – | – | |
| TMHMM | 241 | 263 | 23 | – | – | |
| Phobius | 242 | 264 | 23 | – | – | |
| Phobius | 265 | 362 | 98 | – | – | |
| MobiDBLite | 271 | 291 | 21 | – | – | |
| Gene3D | 344 | 515 | 172 | 1.30E-10 | – | |
| SUPERFAMILY | 345 | 515 | 171 | 8.63E-20 | ||
| Phobius | 363 | 381 | 19 | – | – | |
| TMHMM | 363 | 381 | 19 | – | – | |
| CDD | 363 | 509 | 147 | 5.54E-05 | ||
| Phobius | 382 | 395 | 14 | – | – | |
| Phobius | 396 | 418 | 23 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 419 | 429 | 11 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 430 | 449 | 20 | – | – | |
| Phobius | 450 | 454 | 5 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Phobius | 455 | 477 | 23 | – | – | |
| Phobius | 478 | 488 | 11 | – | – | |
| TMHMM | 486 | 508 | 23 | – | – | |
| Phobius | 489 | 509 | 21 | – | – | |
| Phobius | 510 | 550 | 41 | – | – | |
| Gene3D | 547 | 577 | 31 | 1.30E-10 | – | |
| SUPERFAMILY | 549 | 577 | 29 | 8.63E-20 | ||
| Phobius | 551 | 574 | 24 | – | – | |
| TMHMM | 552 | 574 | 23 | – | – | |
| Phobius | 575 | 593 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3835580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3835580.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.