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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3835680 |
| Transcript ID | Lj1g3v3835680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | nodulin-like protein, mRNA [Zea mays] gi|413920529|gb|AFW60461.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 150 | 150 | 1.50E-45 | ||
| PANTHER | 1 | 275 | 275 | 8.40E-142 | – | |
| Phobius | 1 | 33 | 33 | – | – | |
| PANTHER | 1 | 275 | 275 | 8.40E-142 | – | |
| TMHMM | 32 | 54 | 23 | – | – | |
| Phobius | 34 | 56 | 23 | – | – | |
| Phobius | 57 | 62 | 6 | – | – | |
| Phobius | 63 | 82 | 20 | – | – | |
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 83 | 101 | 19 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| SUPERFAMILY | 101 | 167 | 67 | 1.44E-07 | ||
| Phobius | 102 | 120 | 19 | – | – | |
| Phobius | 121 | 131 | 11 | – | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 132 | 152 | 21 | – | – | |
| Phobius | 153 | 215 | 63 | – | – | |
| SUPERFAMILY | 197 | 273 | 77 | 1.44E-07 | ||
| TMHMM | 216 | 234 | 19 | – | – | |
| Phobius | 216 | 237 | 22 | – | – | |
| Phobius | 238 | 248 | 11 | – | – | |
| Phobius | 249 | 270 | 22 | – | – | |
| TMHMM | 249 | 271 | 23 | – | – | |
| Phobius | 271 | 276 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v3835680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3835680.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.