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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3904490 |
| Transcript ID | Lj1g3v3904490.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Ubiquinol-cytochrome c reductase iron-sulfur subunit [Medicago truncatula] gi|357508447|ref|XP_003624512.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 111 | 111 | – | – | |
| PANTHER | 2 | 247 | 246 | 1.20E-121 | – | |
| PANTHER | 2 | 247 | 246 | 1.20E-121 | ||
| SUPERFAMILY | 91 | 147 | 57 | 1.05E-14 | – | |
| Pfam | 96 | 145 | 50 | 1.30E-11 | ||
| Gene3D | 105 | 134 | 30 | 8.80E-06 | ||
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 112 | 133 | 22 | – | – | |
| TIGRFAM | 130 | 247 | 118 | 7.10E-43 | ||
| Phobius | 134 | 247 | 114 | – | – | |
| Gene3D | 135 | 247 | 113 | 4.00E-33 | ||
| SUPERFAMILY | 136 | 247 | 112 | 4.27E-32 | ||
| CDD | 151 | 247 | 97 | 3.22E-64 | – | |
| Pfam | 157 | 247 | 91 | 2.40E-07 | ||
| ProSiteProfiles | 204 | 247 | 44 | 14.81 | ||
| PRINTS | 212 | 223 | 12 | 1.10E-08 | ||
| PRINTS | 234 | 246 | 13 | 1.10E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquinol-cytochrome-c reductase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on diphenols and related substances as donors | Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | 2 iron, 2 sulfur cluster binding | Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v3904490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3904490.1, powered by CORGI.
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