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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005805
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.511s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3904490.1
n.a. Ubiquinol-cytochrome c reductase iron-sulfur subunit [Medicago truncatula] gi|357508447|ref|XP_003624512.1| chr1 45518065 45520546 +
2 domain predictions
2 GO terms
Lj3g3v2742950.1
n.a. PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Glycine max] gi|356549980|ref|XP_003543368.1| chr3 33926941 33929694 +
2 domain predictions
2 GO terms
LotjaGi1g1v0633700.1
n.a. Cytochrome b-c1 complex subunit Rieske, mitochondrial; TAIR: AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit; Swiss-Prot: sp|P49727|UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial; TrEMBL-Plants: tr|I3SAX8|I3SAX8_LOTJA Cytochrome b-c1 complex subunit Rieske, mitochondrial; Found in the gene: LotjaGi1g1v0633700 LjG1.1_chr1 118760469 118765263 +
2 domain predictions
2 GO terms
LotjaGi2g1v0104600.1
n.a. Cytochrome b-c1 complex subunit Rieske, mitochondrial; TAIR: AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit; Swiss-Prot: sp|P51132|UCRI2_TOBAC Cytochrome b-c1 complex subunit Rieske-2, mitochondrial; TrEMBL-Plants: tr|A0A0L9T7J6|A0A0L9T7J6_PHAAN Cytochrome b-c1 complex subunit Rieske, mitochondrial; Found in the gene: LotjaGi2g1v0104600 LjG1.1_chr2 35048191 35053128 +
2 domain predictions
2 GO terms
LotjaGi3g1v0438600.1
n.a. Cytochrome b6-f complex iron-sulfur subunit; TAIR: AT4G03280.1 photosynthetic electron transfer C; Swiss-Prot: sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic; TrEMBL-Plants: tr|I3RZ73|I3RZ73_LOTJA Cytochrome b6-f complex iron-sulfur subunit; Found in the gene: LotjaGi3g1v0438600 LjG1.1_chr3 85169070 85172274 +
2 domain predictions
2 GO terms
LotjaGi3g1v0438600.2
n.a. Cytochrome b6-f complex iron-sulfur subunit; TAIR: AT4G03280.1 photosynthetic electron transfer C; Swiss-Prot: sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic; TrEMBL-Plants: tr|I3RZ73|I3RZ73_LOTJA Cytochrome b6-f complex iron-sulfur subunit; Found in the gene: LotjaGi3g1v0438600 LjG1.1_chr3 85169470 85171589 +
2 domain predictions
2 GO terms