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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3918060 |
| Transcript ID | Lj1g3v3918060.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: histidine biosynthesis bifunctional protein hisIE, chloroplastic-like isoform X2 [Cicer arietinum] gi|502106940|ref|XP_004493105.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 283 | 283 | 3.30E-145 | – | |
| PANTHER | 1 | 283 | 283 | 3.30E-145 | – | |
| SUPERFAMILY | 53 | 155 | 103 | 1.96E-37 | – | |
| Hamap | 54 | 266 | 213 | 30.016 | ||
| Pfam | 78 | 151 | 74 | 2.70E-27 | ||
| ProDom | 101 | 154 | 54 | 5.00E-26 | ||
| SUPERFAMILY | 173 | 265 | 93 | 6.17E-15 | – | |
| CDD | 173 | 261 | 89 | 5.31E-26 | ||
| TIGRFAM | 173 | 261 | 89 | 1.10E-20 | ||
| Pfam | 175 | 264 | 90 | 9.50E-11 | ||
| Gene3D | 185 | 258 | 74 | 6.20E-05 | – | |
| Coils | 209 | 229 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Histidine biosynthetic process | The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. | ||
| Molecular function | Phosphoribosyl-AMP cyclohydrolase activity | Catalysis of the reaction: 1-(5-phosphonatoribosyl)-5'-AMP + H(2)O = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide. | ||
| Molecular function | Phosphoribosyl-ATP diphosphatase activity | Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + H(2)O = 1-(5-phosphonatoribosyl)-5'-AMP + diphosphate + H(+). |
Expression pattern of Lj1g3v3918060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3918060.1, powered by CORGI.
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