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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4058580 |
| Transcript ID | Lj1g3v4058580.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Rpp4 candidate [Medicago truncatula] gi|357509125|ref|XP_003624851.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 685 | 685 | 2.50E-195 | – | |
| PANTHER | 1 | 685 | 685 | 2.50E-195 | – | |
| Coils | 30 | 64 | 35 | – | – | |
| Coils | 72 | 99 | 28 | – | – | |
| Coils | 152 | 172 | 21 | – | – | |
| SUPERFAMILY | 153 | 404 | 252 | 6.61E-45 | ||
| Gene3D | 158 | 322 | 165 | 2.40E-16 | ||
| Pfam | 160 | 426 | 267 | 2.40E-52 | ||
| PRINTS | 176 | 191 | 16 | 1.40E-16 | – | |
| PRINTS | 250 | 264 | 15 | 1.40E-16 | – | |
| PRINTS | 342 | 356 | 15 | 1.40E-16 | – | |
| SUPERFAMILY | 468 | 836 | 369 | 4.65E-20 | ||
| Gene3D | 534 | 688 | 155 | 3.60E-16 | ||
| PRINTS | 619 | 635 | 17 | 1.40E-16 | – | |
| Gene3D | 741 | 850 | 110 | 6.20E-11 | ||
| PANTHER | 756 | 791 | 36 | 2.50E-195 | – | |
| PANTHER | 756 | 791 | 36 | 2.50E-195 | – | |
| SUPERFAMILY | 769 | 846 | 78 | 1.33E-09 | – | |
| SUPERFAMILY | 902 | 1077 | 176 | 1.33E-09 | – | |
| Gene3D | 907 | 1078 | 172 | 6.20E-11 | ||
| PANTHER | 963 | 992 | 30 | 2.50E-195 | – | |
| PANTHER | 963 | 992 | 30 | 2.50E-195 | – | |
| SUPERFAMILY | 1273 | 1401 | 129 | 4.71E-15 | – | |
| SUPERFAMILY | 1457 | 1576 | 120 | 4.71E-15 | – | |
| PANTHER | 1468 | 1493 | 26 | 2.50E-195 | – | |
| PANTHER | 1468 | 1493 | 26 | 2.50E-195 | – | |
| PANTHER | 1592 | 1615 | 24 | 2.50E-195 | – | |
| PANTHER | 1592 | 1615 | 24 | 2.50E-195 | – | |
| Coils | 1974 | 1986 | 13 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of Lj1g3v4058580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4058580.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.