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Lj1g3v4058600.1

Overview

Field Value
Gene ID Lj1g3v4058600
Transcript ID Lj1g3v4058600.1
Lotus japonicus genome version MG20 v3.0
Description Disease resistance protein [Medicago truncatula] gi|124359532|gb|ABN05954.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23155
1 715 715 4.40E-190 –
PANTHER
PTHR23155:SF554
1 715 715 4.40E-190 –
Coils
Coil
30 64 35 – –
Coils
Coil
72 99 28 – –
Coils
Coil
152 172 21 – –
SUPERFAMILY
SSF52540
153 404 252 1.71E-45
IPR027417
Gene3D
G3DSA:3.40.50.300
158 322 165 7.50E-17
IPR027417
Pfam
PF00931
160 426 267 6.10E-53
IPR002182
PRINTS
PR00364
176 191 16 6.10E-18 –
PRINTS
PR00364
250 264 15 6.10E-18 –
PRINTS
PR00364
342 356 15 6.10E-18 –
SUPERFAMILY
SSF52058
468 836 369 5.95E-21
IPR032675
Gene3D
G3DSA:3.80.10.10
542 654 113 3.60E-16
IPR032675
PRINTS
PR00364
619 635 17 6.10E-18 –
PANTHER
PTHR23155
732 793 62 4.40E-190 –
PANTHER
PTHR23155:SF554
732 793 62 4.40E-190 –
PANTHER
PTHR23155
830 853 24 4.40E-190 –
PANTHER
PTHR23155:SF554
830 853 24 4.40E-190 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v4058600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4058600.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.