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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4082070 |
| Transcript ID | Lj1g3v4082070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide transporter PTR5 [Medicago truncatula] gi|357509215|ref|XP_003624896.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 109 | 109 | – | – | |
| PANTHER | 1 | 609 | 609 | 0 | – | |
| PANTHER | 1 | 609 | 609 | 0 | ||
| SUPERFAMILY | 19 | 249 | 231 | 6.67E-29 | ||
| Gene3D | 44 | 245 | 202 | 5.00E-11 | – | |
| CDD | 49 | 242 | 194 | 2.16E-08 | ||
| TMHMM | 72 | 94 | 23 | – | – | |
| Pfam | 102 | 536 | 435 | 1.10E-90 | ||
| TMHMM | 104 | 126 | 23 | – | – | |
| Phobius | 110 | 128 | 19 | – | – | |
| Phobius | 129 | 147 | 19 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 148 | 169 | 22 | – | – | |
| Phobius | 170 | 189 | 20 | – | – | |
| TMHMM | 189 | 211 | 23 | – | – | |
| Phobius | 190 | 212 | 23 | – | – | |
| Phobius | 213 | 217 | 5 | – | – | |
| TMHMM | 218 | 240 | 23 | – | – | |
| Phobius | 218 | 243 | 26 | – | – | |
| Phobius | 244 | 343 | 100 | – | – | |
| SUPERFAMILY | 325 | 582 | 258 | 6.67E-29 | ||
| TMHMM | 341 | 363 | 23 | – | – | |
| Phobius | 344 | 363 | 20 | – | – | |
| Phobius | 364 | 382 | 19 | – | – | |
| Phobius | 383 | 401 | 19 | – | – | |
| TMHMM | 383 | 405 | 23 | – | – | |
| Phobius | 402 | 421 | 20 | – | – | |
| TMHMM | 420 | 442 | 23 | – | – | |
| Phobius | 422 | 442 | 21 | – | – | |
| Phobius | 443 | 461 | 19 | – | – | |
| TMHMM | 462 | 484 | 23 | – | – | |
| Phobius | 462 | 484 | 23 | – | – | |
| Phobius | 485 | 504 | 20 | – | – | |
| TMHMM | 504 | 526 | 23 | – | – | |
| Phobius | 505 | 530 | 26 | – | – | |
| Phobius | 531 | 549 | 19 | – | – | |
| Phobius | 550 | 573 | 24 | – | – | |
| TMHMM | 550 | 572 | 23 | – | – | |
| Phobius | 574 | 616 | 43 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4082070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4082070.1, powered by CORGI.
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