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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4225520 |
| Transcript ID | Lj1g3v4225520.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial-like [Glycine max] gi|356536427|ref|XP_003536739.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | – | – | |
| PANTHER | 47 | 211 | 165 | 9.40E-112 | – | |
| Phobius | 48 | 66 | 19 | – | – | |
| TMHMM | 48 | 67 | 20 | – | – | |
| Phobius | 67 | 85 | 19 | – | – | |
| Gene3D | 79 | 348 | 270 | 7.60E-94 | ||
| TIGRFAM | 81 | 348 | 268 | 4.30E-80 | ||
| SUPERFAMILY | 82 | 348 | 267 | 1.22E-62 | – | |
| CDD | 85 | 348 | 264 | 4.90E-127 | ||
| Phobius | 86 | 108 | 23 | – | – | |
| Phobius | 109 | 348 | 240 | – | – | |
| Pfam | 119 | 348 | 230 | 3.10E-66 | ||
| ProSitePatterns | 154 | 173 | 20 | – | ||
| MobiDBLite | 205 | 235 | 31 | – | – | |
| PANTHER | 232 | 348 | 117 | 9.40E-112 | – | |
| Coils | 280 | 300 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Dihydroorotate dehydrogenase activity | Catalysis of the reaction: (S)-dihydroorotate + A = AH(2) + orotate. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | 'de novo' pyrimidine nucleobase biosynthetic process | The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v4225520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4225520.1, powered by CORGI.
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