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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4241100 |
| Transcript ID | Lj1g3v4241100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like [Glycine max] gi|356503440|ref|XP_003520516.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 261 | 260 | 1.60E-113 | – | |
| PANTHER | 2 | 261 | 260 | 1.60E-113 | – | |
| Pfam | 9 | 56 | 48 | 2.00E-13 | ||
| ProSiteProfiles | 10 | 44 | 35 | 13.746 | ||
| Gene3D | 11 | 212 | 202 | 8.80E-11 | ||
| TIGRFAM | 12 | 46 | 35 | 2.00E-10 | ||
| ProSiteProfiles | 45 | 79 | 35 | 6.193 | ||
| Pfam | 80 | 128 | 49 | 5.60E-15 | ||
| ProSiteProfiles | 80 | 114 | 35 | 10.654 | ||
| TIGRFAM | 82 | 115 | 34 | 2.90E-07 | ||
| ProSiteProfiles | 115 | 149 | 35 | 10.348 | ||
| TIGRFAM | 117 | 147 | 31 | 5.80E-06 | ||
| ProSiteProfiles | 150 | 184 | 35 | 11.29 | ||
| TIGRFAM | 153 | 186 | 34 | 4.20E-10 | ||
| Pfam | 153 | 196 | 44 | 1.40E-12 | ||
| ProSiteProfiles | 185 | 219 | 35 | 12.408 | ||
| TIGRFAM | 187 | 221 | 35 | 4.30E-10 | ||
| Pfam | 208 | 252 | 45 | 2.30E-04 | ||
| ProSiteProfiles | 220 | 254 | 35 | 8.605 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4241100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4241100.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.