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Lj1g3v4372190.1

Overview

Field Value
Gene ID Lj1g3v4372190
Transcript ID Lj1g3v4372190.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable protein kinase At2g41970-like [Glycine max] gi|356570526|ref|XP_003553436.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 54 54 – –
PANTHER
PTHR27001
1 365 365 2.10E-272 –
PANTHER
PTHR27001:SF202
1 365 365 2.10E-272 –
Gene3D
G3DSA:3.30.200.20
49 137 89 1.90E-20 –
SUPERFAMILY
SSF56112
54 353 300 2.05E-68
IPR011009
ProSiteProfiles
PS50011
75 357 283 34.831
IPR000719
SMART
SM00219
75 353 279 4.00E-24
IPR020635
Pfam
PF07714
80 353 274 2.90E-45
IPR001245
ProSitePatterns
PS00107
81 104 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
138 350 213 2.00E-39 –
ProSitePatterns
PS00109
203 215 13 –
IPR008266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0004713
Molecular function Protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj1g3v4372190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4372190.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.