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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4405440 |
| Transcript ID | Lj1g3v4405440.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 7-like [Cicer arietinum] gi|502109384|ref|XP_004493632.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 440 | 440 | 29.115 | ||
| Phobius | 1 | 35 | 35 | – | – | |
| PANTHER | 2 | 452 | 451 | 0 | – | |
| PANTHER | 2 | 452 | 451 | 0 | – | |
| SUPERFAMILY | 35 | 447 | 413 | 3.53E-50 | ||
| TMHMM | 36 | 58 | 23 | – | – | |
| Phobius | 36 | 58 | 23 | – | – | |
| Gene3D | 36 | 105 | 70 | 2.10E-05 | – | |
| CDD | 43 | 436 | 394 | 2.75E-13 | ||
| Phobius | 59 | 78 | 20 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 79 | 99 | 21 | – | – | |
| Phobius | 100 | 118 | 19 | – | – | |
| PRINTS | 112 | 131 | 20 | 5.20E-16 | ||
| TIGRFAM | 113 | 446 | 334 | 5.90E-74 | ||
| Gene3D | 113 | 199 | 87 | 8.70E-09 | – | |
| Pfam | 113 | 449 | 337 | 4.40E-75 | ||
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 119 | 137 | 19 | – | – | |
| Phobius | 138 | 143 | 6 | – | – | |
| Phobius | 144 | 163 | 20 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 164 | 168 | 5 | – | – | |
| Phobius | 169 | 190 | 22 | – | – | |
| TMHMM | 171 | 190 | 20 | – | – | |
| Phobius | 191 | 253 | 63 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 254 | 276 | 23 | – | – | |
| Gene3D | 255 | 446 | 192 | 1.00E-14 | – | |
| PRINTS | 264 | 274 | 11 | 5.20E-16 | ||
| Phobius | 277 | 281 | 5 | – | – | |
| Phobius | 282 | 309 | 28 | – | – | |
| TMHMM | 287 | 309 | 23 | – | – | |
| ProSitePatterns | 305 | 322 | 18 | – | ||
| Phobius | 310 | 315 | 6 | – | – | |
| Phobius | 316 | 338 | 23 | – | – | |
| TMHMM | 316 | 338 | 23 | – | – | |
| Phobius | 339 | 349 | 11 | – | – | |
| Phobius | 350 | 375 | 26 | – | – | |
| PRINTS | 353 | 374 | 22 | 5.20E-16 | ||
| TMHMM | 353 | 375 | 23 | – | – | |
| PRINTS | 376 | 388 | 13 | 5.20E-16 | ||
| Phobius | 376 | 386 | 11 | – | – | |
| Phobius | 387 | 406 | 20 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 407 | 417 | 11 | – | – | |
| TMHMM | 414 | 436 | 23 | – | – | |
| Phobius | 418 | 436 | 19 | – | – | |
| Phobius | 437 | 453 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4405440.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4405440.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.