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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4432120 |
| Transcript ID | Lj1g3v4432120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max] gi|356503541|ref|XP_003520566.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 475 | 475 | – | – | |
| PANTHER | 3 | 188 | 186 | 3.80E-107 | – | |
| PANTHER | 3 | 188 | 186 | 3.80E-107 | – | |
| SUPERFAMILY | 42 | 125 | 84 | 1.56E-12 | ||
| Gene3D | 51 | 137 | 87 | 9.40E-05 | ||
| ProSitePatterns | 67 | 79 | 13 | – | ||
| Pfam | 91 | 174 | 84 | 2.50E-24 | ||
| SUPERFAMILY | 177 | 238 | 62 | 1.56E-12 | ||
| Gene3D | 179 | 209 | 31 | 9.40E-05 | ||
| ProSitePatterns | 187 | 199 | 13 | – | ||
| Pfam | 211 | 278 | 68 | 3.50E-21 | ||
| Gene3D | 276 | 466 | 191 | 2.20E-19 | ||
| ProSiteProfiles | 278 | 456 | 179 | 12.903 | ||
| CDD | 281 | 460 | 180 | 4.05E-62 | – | |
| SUPERFAMILY | 281 | 455 | 175 | 2.37E-22 | ||
| PRINTS | 285 | 306 | 22 | 2.40E-05 | – | |
| Pfam | 289 | 410 | 122 | 2.10E-08 | ||
| PRINTS | 308 | 324 | 17 | 2.40E-05 | – | |
| PRINTS | 393 | 406 | 14 | 2.40E-05 | – | |
| TMHMM | 475 | 497 | 23 | – | – | |
| Phobius | 476 | 497 | 22 | – | – | |
| Phobius | 498 | 504 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj1g3v4432120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4432120.1, powered by CORGI.
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