Domain Predictions — View

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PS51423

Source: ProSiteProfiles

Description

Miro domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003924 View details of GO:0003924 AmiGO InterPro QuickGO	Molecular function	GTPase activity	Catalysis of the reaction: GTP + H2O = GDP + phosphate.	Subterm of GO:0017111
GO:0005525 View details of GO:0005525 AmiGO InterPro QuickGO	Molecular function	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.	Subterm of GO:0032550 GO:0032561 GO:0035639

Associated Lotus transcripts 8

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4432120.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max] gi\|356503541\|ref\|XP_003520566.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PR00449 PS00018 PS51423 PTHR24072 PTHR24072:SF166 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	24
Lj5g3v0975690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max] gi\|356535940\|ref\|XP_003536499.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PS00018 PS51423 PTHR24072 PTHR24072:SF166 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	23
Lj5g3v0975690.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max] gi\|356535940\|ref\|XP_003536499.1\|	Domains G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR011992 IPR013567 IPR018247 IPR020860 IPR027417 PF00071 PF08356 PR00449 PS00018 PS51423 PTHR24072 PTHR24072:SF166 SM00174 SM00175 SSF47473 SSF52540	19
Lj5g3v1494630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: mitochondrial Rho GTPase 1-like [Glycine max] gi\|356576775\|ref\|XP_003556505.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR002048 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR021181 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PIRSF037488 PR00449 PS00018 PS50222 PS51423 PTHR24072 PTHR24072:SF166 SM00174 SM00175 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	30
LotjaGi1g1v0728100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mitochondrial Rho GTPase; TAIR: AT3G63150.1 MIRO-related GTP-ase 2; Swiss-Prot: sp\|F4J0W4\|MIRO2_ARATH Mitochondrial Rho GTPase 2; TrEMBL-Plants: tr\|I1N9H1\|I1N9H1_SOYBN Mitochondrial Rho GTPase; Found in the gene: LotjaGi1g1v0728100	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR021181 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PIRSF037488 PR00449 PS00018 PS51423 PTHR24072 PTHR24072:SF284 SM00173 SM00174 SM00175 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	29
LotjaGi5g1v0166400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mitochondrial Rho GTPase; TAIR: AT3G63150.1 MIRO-related GTP-ase 2; Swiss-Prot: sp\|F4J0W4\|MIRO2_ARATH Mitochondrial Rho GTPase 2; TrEMBL-Plants: tr\|A0A0R0HXF0\|A0A0R0HXF0_SOYBN Mitochondrial Rho GTPase; Found in the gene: LotjaGi5g1v0166400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PS00018 PS51423 PTHR24072 PTHR24072:SF284 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	23
LotjaGi5g1v0166400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mitochondrial Rho GTPase; TAIR: AT3G63150.1 MIRO-related GTP-ase 2; Swiss-Prot: sp\|F4J0W4\|MIRO2_ARATH Mitochondrial Rho GTPase 2; TrEMBL-Plants: tr\|I1L835\|I1L835_SOYBN Mitochondrial Rho GTPase; Found in the gene: LotjaGi5g1v0166400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR021181 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PIRSF037488 PR00449 PS00018 PS51423 PTHR24072 PTHR24072:SF284 SM00174 SM00175 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	28
LotjaGi5g1v0220400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mitochondrial Rho GTPase; TAIR: AT5G27540.1 MIRO-related GTP-ase 1; Swiss-Prot: sp\|Q8RXF8\|MIRO1_ARATH Mitochondrial Rho GTPase 1; TrEMBL-Plants: tr\|A0A1J7FS16\|A0A1J7FS16_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0220400	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.238.10 G3DSA:3.40.50.300 IPR001806 IPR002048 IPR011992 IPR013566 IPR013567 IPR018247 IPR020860 IPR021181 IPR027417 NON_CYTOPLASMIC_DOMAIN PF00071 PF08355 PF08356 PIRSF037488 PR00449 PS00018 PS50222 PS51423 PTHR24072 PTHR24072:SF313 SM00174 SM00175 SSF47473 SSF52540 TMhelix TRANSMEMBRANE cd01892	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01892	CDD	1	12.50