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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4446910 |
| Transcript ID | Lj1g3v4446910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sulfate transporter 3.1-like [Glycine max] gi|356504955|ref|XP_003521258.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 105 | 105 | – | – | |
| PANTHER | 16 | 651 | 636 | 0 | ||
| PANTHER | 16 | 651 | 636 | 0 | ||
| TIGRFAM | 66 | 629 | 564 | 4.20E-181 | ||
| Pfam | 79 | 459 | 381 | 9.90E-131 | ||
| Phobius | 106 | 125 | 20 | – | – | |
| Phobius | 126 | 130 | 5 | – | – | |
| TMHMM | 131 | 149 | 19 | – | – | |
| Phobius | 131 | 148 | 18 | – | – | |
| Phobius | 149 | 159 | 11 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 160 | 183 | 24 | – | – | |
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 184 | 188 | 5 | – | – | |
| Phobius | 189 | 208 | 20 | – | – | |
| Phobius | 209 | 243 | 35 | – | – | |
| TMHMM | 244 | 261 | 18 | – | – | |
| Phobius | 244 | 262 | 19 | – | – | |
| Phobius | 263 | 267 | 5 | – | – | |
| Phobius | 268 | 289 | 22 | – | – | |
| TMHMM | 268 | 290 | 23 | – | – | |
| Phobius | 290 | 329 | 40 | – | – | |
| TMHMM | 321 | 343 | 23 | – | – | |
| Phobius | 330 | 350 | 21 | – | – | |
| Phobius | 351 | 361 | 11 | – | – | |
| Phobius | 362 | 380 | 19 | – | – | |
| TMHMM | 364 | 381 | 18 | – | – | |
| Phobius | 381 | 391 | 11 | – | – | |
| Phobius | 392 | 414 | 23 | – | – | |
| TMHMM | 396 | 418 | 23 | – | – | |
| Phobius | 415 | 419 | 5 | – | – | |
| Phobius | 420 | 440 | 21 | – | – | |
| TMHMM | 423 | 445 | 23 | – | – | |
| Phobius | 441 | 451 | 11 | – | – | |
| Phobius | 452 | 482 | 31 | – | – | |
| TMHMM | 460 | 482 | 23 | – | – | |
| Phobius | 483 | 656 | 174 | – | – | |
| ProSiteProfiles | 510 | 633 | 124 | 30.734 | ||
| Pfam | 511 | 629 | 119 | 3.50E-36 | ||
| CDD | 511 | 626 | 116 | 4.33E-28 | – | |
| SUPERFAMILY | 512 | 633 | 122 | 2.75E-22 | ||
| Gene3D | 513 | 633 | 121 | 1.60E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4446910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4446910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.