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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4515810 |
| Transcript ID | Lj1g3v4515810.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide transporter PTR3-A [Medicago truncatula] gi|357510113|ref|XP_003625345.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 99 | 99 | – | – | |
| PANTHER | 1 | 627 | 627 | 0 | – | |
| PANTHER | 1 | 627 | 627 | 0 | ||
| SUPERFAMILY | 50 | 274 | 225 | 1.70E-20 | ||
| CDD | 60 | 263 | 204 | 3.25E-06 | ||
| Phobius | 100 | 118 | 19 | – | – | |
| Phobius | 119 | 124 | 6 | – | – | |
| Phobius | 125 | 151 | 27 | – | – | |
| TMHMM | 125 | 147 | 23 | – | – | |
| Pfam | 125 | 554 | 430 | 6.40E-100 | ||
| Phobius | 152 | 170 | 19 | – | – | |
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 171 | 189 | 19 | – | – | |
| Phobius | 190 | 216 | 27 | – | – | |
| TMHMM | 216 | 238 | 23 | – | – | |
| Phobius | 217 | 238 | 22 | – | – | |
| Phobius | 239 | 243 | 5 | – | – | |
| TMHMM | 242 | 264 | 23 | – | – | |
| Phobius | 244 | 264 | 21 | – | – | |
| Phobius | 265 | 361 | 97 | – | – | |
| TMHMM | 360 | 382 | 23 | – | – | |
| Phobius | 362 | 382 | 21 | – | – | |
| SUPERFAMILY | 381 | 585 | 205 | 1.70E-20 | ||
| Phobius | 383 | 401 | 19 | – | – | |
| TMHMM | 402 | 424 | 23 | – | – | |
| Phobius | 402 | 425 | 24 | – | – | |
| Phobius | 426 | 436 | 11 | – | – | |
| TMHMM | 436 | 458 | 23 | – | – | |
| Phobius | 437 | 458 | 22 | – | – | |
| Phobius | 459 | 477 | 19 | – | – | |
| TMHMM | 478 | 499 | 22 | – | – | |
| Phobius | 478 | 499 | 22 | – | – | |
| Phobius | 500 | 519 | 20 | – | – | |
| TMHMM | 520 | 542 | 23 | – | – | |
| Phobius | 520 | 545 | 26 | – | – | |
| Phobius | 546 | 564 | 19 | – | – | |
| Phobius | 565 | 589 | 25 | – | – | |
| TMHMM | 566 | 588 | 23 | – | – | |
| Phobius | 590 | 627 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4515810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4515810.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.