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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4515810 |
| Transcript ID | Lj1g3v4515810.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: peptide transporter PTR3-A-like [Glycine max] gi|356570660|ref|XP_003553503.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 618 | 618 | 0 | ||
| PANTHER | 1 | 618 | 618 | 0 | – | |
| Phobius | 1 | 120 | 120 | – | – | |
| SUPERFAMILY | 44 | 270 | 227 | 2.22E-20 | ||
| CDD | 64 | 260 | 197 | 6.11E-05 | ||
| Gene3D | 64 | 263 | 200 | 2.10E-07 | – | |
| Phobius | 121 | 147 | 27 | – | – | |
| TMHMM | 121 | 143 | 23 | – | – | |
| Pfam | 121 | 549 | 429 | 2.00E-103 | ||
| Phobius | 148 | 166 | 19 | – | – | |
| Phobius | 167 | 184 | 18 | – | – | |
| TMHMM | 169 | 191 | 23 | – | – | |
| Phobius | 185 | 212 | 28 | – | – | |
| TMHMM | 212 | 234 | 23 | – | – | |
| Phobius | 213 | 234 | 22 | – | – | |
| Phobius | 235 | 245 | 11 | – | – | |
| TMHMM | 238 | 260 | 23 | – | – | |
| Phobius | 246 | 265 | 20 | – | – | |
| Phobius | 266 | 354 | 89 | – | – | |
| SUPERFAMILY | 327 | 587 | 261 | 2.22E-20 | ||
| Phobius | 355 | 376 | 22 | – | – | |
| TMHMM | 355 | 377 | 23 | – | – | |
| Phobius | 377 | 395 | 19 | – | – | |
| Phobius | 396 | 413 | 18 | – | – | |
| TMHMM | 397 | 419 | 23 | – | – | |
| Phobius | 414 | 433 | 20 | – | – | |
| TMHMM | 431 | 453 | 23 | – | – | |
| Phobius | 434 | 453 | 20 | – | – | |
| Phobius | 454 | 472 | 19 | – | – | |
| Phobius | 473 | 495 | 23 | – | – | |
| TMHMM | 473 | 495 | 23 | – | – | |
| Phobius | 496 | 515 | 20 | – | – | |
| Phobius | 516 | 541 | 26 | – | – | |
| TMHMM | 516 | 538 | 23 | – | – | |
| Phobius | 542 | 560 | 19 | – | – | |
| Phobius | 561 | 584 | 24 | – | – | |
| TMHMM | 562 | 584 | 23 | – | – | |
| Phobius | 585 | 622 | 38 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v4515810.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4515810.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.