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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4549020 |
| Transcript ID | Lj1g3v4549020.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription factor PIF1-like isoform X1 [Cicer arietinum] gi|502110344|ref|XP_004493858.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 190 | 190 | – | – | |
| MobiDBLite | 32 | 164 | 133 | – | – | |
| PRINTS | 47 | 59 | 13 | 5.60E-09 | – | |
| PRINTS | 66 | 82 | 17 | 5.60E-09 | – | |
| PRINTS | 91 | 103 | 13 | 5.60E-09 | – | |
| PRINTS | 103 | 124 | 22 | 5.60E-09 | – | |
| PANTHER | 146 | 349 | 204 | 3.40E-54 | – | |
| PANTHER | 146 | 349 | 204 | 3.40E-54 | – | |
| Pfam | 188 | 302 | 115 | 4.60E-16 | ||
| Phobius | 191 | 208 | 18 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 209 | 249 | 41 | – | – | |
| Phobius | 250 | 269 | 20 | – | – | |
| TMHMM | 250 | 272 | 23 | – | – | |
| Phobius | 270 | 280 | 11 | – | – | |
| TMHMM | 279 | 301 | 23 | – | – | |
| Phobius | 281 | 305 | 25 | – | – | |
| Phobius | 306 | 316 | 11 | – | – | |
| Phobius | 317 | 342 | 26 | – | – | |
| TMHMM | 321 | 343 | 23 | – | – | |
| Phobius | 343 | 365 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v4549020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4549020.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.