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Lj1g3v4591060.1

Overview

Field Value
Gene ID Lj1g3v4591060
Transcript ID Lj1g3v4591060.1
Lotus japonicus genome version MG20 v3.0
Description CDC48-like protein [Mirabilis jalapa] gi|30013699|gb|AAP03644.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23077
1 114 114 1.10E-76 –
PANTHER
PTHR23077:SF79
1 114 114 1.10E-76 –
Pfam
PF00004
1 40 40 8.10E-08
IPR003959
Gene3D
G3DSA:3.40.50.300
1 48 48 1.40E-14
IPR027417
SUPERFAMILY
SSF52540
1 101 101 4.00E-26
IPR027417
ProSitePatterns
PS00674
10 28 19 –
IPR003960
Gene3D
G3DSA:1.10.8.60
49 103 55 2.10E-19 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v4591060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4591060.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.