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Lj1g3v4719660.2

Overview

Field Value
Gene ID Lj1g3v4719660
Transcript ID Lj1g3v4719660.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: peptidyl-prolyl cis-trans isomerase-like 1-like [Cicer arietinum] gi|502111994|ref|XP_004494215.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-noTM_EUK
1 27 27 – –
Gene3D
G3DSA:2.40.100.10
38 197 160 9.20E-72
IPR029000
SUPERFAMILY
SSF50891
46 197 152 2.19E-62
IPR029000
Pfam
PF00160
47 196 150 5.40E-51
IPR002130
PANTHER
PTHR11071
48 199 152 1.40E-112
IPR024936
PANTHER
PTHR11071:SF270
48 199 152 1.40E-112 –
ProSiteProfiles
PS50072
50 197 148 34.353
IPR002130
PRINTS
PR00153
60 75 16 5.90E-31
IPR002130
ProSitePatterns
PS00170
81 98 18 –
IPR020892
PRINTS
PR00153
86 98 13 5.90E-31
IPR002130
PRINTS
PR00153
129 144 16 5.90E-31
IPR002130
PRINTS
PR00153
144 156 13 5.90E-31
IPR002130
PRINTS
PR00153
157 172 16 5.90E-31
IPR002130

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000413
Biological process Protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
Subterm of
GO:0003755
Molecular function Peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj1g3v4719660.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4719660.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.