Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v4752480.1

Overview

Field Value
Gene ID Lj1g3v4752480
Transcript ID Lj1g3v4752480.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: BEL1-like homeodomain protein 1-like [Glycine max] gi|356505435|ref|XP_003521496.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
157 176 20 – –
SMART
SM00574
180 315 136 1.10E-59
IPR006563
PANTHER
PTHR11850
182 677 496 1.60E-299 –
PANTHER
PTHR11850:SF111
182 677 496 1.60E-299 –
Pfam
PF07526
185 314 130 2.30E-46
IPR006563
MobiDBLite
mobidb-lite
210 245 36 – –
Coils
Coil
247 274 28 – –
ProSiteProfiles
PS50071
360 423 64 12.05
IPR001356
SMART
SM00389
363 427 65 7.90E-09
IPR001356
CDD
cd00086
363 423 61 4.32E-11 –
SUPERFAMILY
SSF46689
364 430 67 1.71E-16
IPR009057
Gene3D
G3DSA:1.10.10.60
366 430 65 4.80E-27
IPR009057
Pfam
PF05920
380 419 40 7.20E-16
IPR008422
MobiDBLite
mobidb-lite
433 540 108 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj1g3v4752480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4752480.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.