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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4830170 |
| Transcript ID | Lj1g3v4830170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chitinase 10-like [Cicer arietinum] gi|502112896|ref|XP_004494478.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 12 | 23 | 12 | – | – | |
| PIRSF | 16 | 283 | 268 | 6.10E-107 | ||
| Phobius | 24 | 31 | 8 | – | – | |
| Phobius | 32 | 283 | 252 | – | – | |
| PANTHER | 41 | 283 | 243 | 7.80E-191 | – | |
| PANTHER | 41 | 283 | 243 | 7.80E-191 | – | |
| SUPERFAMILY | 42 | 283 | 242 | 1.63E-96 | ||
| Gene3D | 45 | 110 | 66 | 1.70E-53 | – | |
| CDD | 46 | 277 | 232 | 9.32E-133 | ||
| Pfam | 46 | 277 | 232 | 4.70E-105 | ||
| ProSitePatterns | 63 | 85 | 23 | – | ||
| Gene3D | 129 | 184 | 56 | 1.10E-27 | – | |
| Gene3D | 185 | 277 | 93 | 1.70E-53 | – | |
| ProSitePatterns | 190 | 200 | 11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chitinase activity | Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Chitin catabolic process | The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues. | ||
| Biological process | Cell wall macromolecule catabolic process | The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall. |
Expression pattern of Lj1g3v4830170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4830170.1, powered by CORGI.
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