Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0016998

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Cell wall macromolecule catabolic process
Full defintion The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
Subterm of

Relationships

The relationship of GO:0016998 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0016998, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCgo_curators

Associated Lotus transcripts 18

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0213179.1
– PREDICTED: endochitinase-like [Cicer arietinum] gi|502153653|ref|XP_004509418.1|
GO terms
3
Lj0g3v0247049.1
– Class Ia chitinase [Galega orientalis] gi|33414052|gb|AAP03088.1|
GO terms
3
Lj0g3v0276689.1
– Class II chitinase [Arachis hypogaea] gi|295291568|gb|ADF87393.1|
GO terms
3
Lj1g3v3160050.1
– PREDICTED: chitinase-like protein 2-like [Cicer arietinum] gi|502102342|ref|XP_004492044.1|
GO terms
3
Lj1g3v3330050.1
– Class Ia chitinase [Galega orientalis] gi|33414052|gb|AAP03088.1|
GO terms
3
Lj1g3v4830170.1
– PREDICTED: chitinase 10-like [Cicer arietinum] gi|502112896|ref|XP_004494478.1|
GO terms
3
Lj3g3v3336160.1
– PREDICTED: LOW QUALITY PROTEIN: endochitinase PR4-like [Cicer arietinum] gi|502081457|ref|XP_004486869.1|
GO terms
3
Lj6g3v1549220.1
– Endochitinase [Medicago truncatula] gi|357449033|ref|XP_003594792.1|
GO terms
3
LotjaGi1g1v0530200.1
– Chitinase, putative; TAIR: AT1G05850.1 Chitinase family protein; Swiss-Prot: sp|Q9MA41|CTL1_ARATH Chitinase-like protein 1; TrEMBL-Plants: tr|I3S1Z0|I3S1Z0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0530200
GO terms
3
LotjaGi1g1v0556300.1
– Chitinase; TAIR: AT3G12500.1 basic chitinase; Swiss-Prot: sp|P06215|CHIT_PHAVU Endochitinase; TrEMBL-Plants: tr|G7J999|G7J999_MEDTR Chitinase (Class I) / Hevein; Found in the gene: LotjaGi1g1v0556300
GO terms
3
LotjaGi1g1v0754300.1
– Chitinase; TAIR: AT4G01700.1 Chitinase family protein; Swiss-Prot: sp|Q5NB11|CHI10_ORYSJ Chitinase 10; TrEMBL-Plants: tr|C6TNB0|C6TNB0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0754300
GO terms
3
LotjaGi2g1v0287300.1
– Chitinase; TAIR: AT3G12500.1 basic chitinase; Swiss-Prot: sp|P06215|CHIT_PHAVU Endochitinase; TrEMBL-Plants: tr|Q7X9F5|Q7X9F5_9FABA Class Ia chitinase; Found in the gene: LotjaGi2g1v0287300
GO terms
3
LotjaGi3g1v0501600.1
– Chitinase; TAIR: AT3G54420.1 homolog of carrot EP3-3 chitinase; Swiss-Prot: sp|P27054|CHI4_PHAVU Endochitinase PR4; TrEMBL-Plants: tr|I3SA35|I3SA35_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0501600
GO terms
3
LotjaGi3g1v0501600.2
– Chitinase; TAIR: AT3G54420.1 homolog of carrot EP3-3 chitinase; Swiss-Prot: sp|P27054|CHI4_PHAVU Endochitinase PR4; TrEMBL-Plants: tr|I3SA35|I3SA35_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0501600
GO terms
3
LotjaGi3g1v0501600.3
– Chitinase; TAIR: AT3G54420.1 homolog of carrot EP3-3 chitinase; Swiss-Prot: sp|P27054|CHI4_PHAVU Endochitinase PR4; TrEMBL-Plants: tr|I3SA35|I3SA35_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0501600
GO terms
3
LotjaGi4g1v0137500.1
– Chitinase; TAIR: AT3G12500.1 basic chitinase; Swiss-Prot: sp|P36907|CHIX_PEA Endochitinase; TrEMBL-Plants: tr|I3RZQ4|I3RZQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0137500
GO terms
3
LotjaGi5g1v0237600.1
– Chitinase; TAIR: AT4G01700.1 Chitinase family protein; Swiss-Prot: sp|Q5NB11|CHI10_ORYSJ Chitinase 10; TrEMBL-Plants: tr|I3SJS9|I3SJS9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0237600
GO terms
3
LotjaGi6g1v0256500.1
– Chitinase; TAIR: AT3G16920.2 chitinase-like protein; Swiss-Prot: sp|Q9LSP9|CTL2_ARATH Chitinase-like protein 2; TrEMBL-Plants: tr|G7IMU8|G7IMU8_MEDTR Chitinase; Found in the gene: LotjaGi6g1v0256500
GO terms
3

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0016998
Biological process Cell wall macromolecule catabolic process 1 5.56