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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4918600 |
| Transcript ID | Lj1g3v4918600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pectinesterase [Medicago truncatula] gi|357511819|ref|XP_003626198.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 545 | 545 | 0 | – | |
| PANTHER | 1 | 545 | 545 | 0 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| TIGRFAM | 4 | 195 | 192 | 4.20E-22 | ||
| Phobius | 6 | 16 | 11 | – | – | |
| Phobius | 17 | 24 | 8 | – | – | |
| Phobius | 25 | 545 | 521 | – | – | |
| SMART | 35 | 190 | 156 | 4.60E-26 | ||
| Gene3D | 37 | 194 | 158 | 8.10E-27 | ||
| Pfam | 39 | 190 | 152 | 1.80E-18 | ||
| SUPERFAMILY | 39 | 194 | 156 | 1.96E-23 | ||
| CDD | 58 | 194 | 137 | 3.88E-28 | – | |
| SUPERFAMILY | 238 | 542 | 305 | 8.24E-111 | ||
| Gene3D | 239 | 541 | 303 | 4.60E-119 | ||
| Pfam | 241 | 529 | 289 | 2.10E-139 | ||
| ProSitePatterns | 385 | 394 | 10 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of Lj1g3v4918600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4918600.2, powered by CORGI.
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