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Lj1g3v4918780.1

Overview

Field Value
Gene ID Lj1g3v4918780
Transcript ID Lj1g3v4918780.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein phosphatase PP1-like [Glycine max] gi|356505811|ref|XP_003521683.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11668
1 304 304 6.40E-257 –
PANTHER
PTHR11668:SF262
1 304 304 6.40E-257 –
Gene3D
G3DSA:3.60.21.10
7 304 298 4.60E-139
IPR029052
CDD
cd07414
14 301 288 0 –
Pfam
PF16891
15 58 44 3.00E-20
IPR031675
SUPERFAMILY
SSF56300
16 303 288 2.19E-117
IPR029052
SMART
SM00156
33 303 271 6.20E-165
IPR006186
PRINTS
PR00114
61 88 28 5.40E-93
IPR006186
Pfam
PF00149
62 252 191 7.10E-41
IPR004843
PRINTS
PR00114
90 117 28 5.40E-93
IPR006186
PRINTS
PR00114
123 147 25 5.40E-93
IPR006186
ProSitePatterns
PS00125
124 129 6 –
IPR006186
PRINTS
PR00114
157 183 27 5.40E-93
IPR006186
PRINTS
PR00114
186 213 28 5.40E-93
IPR006186
PRINTS
PR00114
243 263 21 5.40E-93
IPR006186
PRINTS
PR00114
265 281 17 5.40E-93
IPR006186

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj1g3v4918780.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4918780.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.