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Lj1g3v4955040.1

Overview

Field Value
Gene ID Lj1g3v4955040
Transcript ID Lj1g3v4955040.1
Lotus japonicus genome version MG20 v3.0
Description glutathione synthetase [Lotus japonicus] gi|37222544|gb|AAK77663.2|AF279703_1
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 24 24 – –
MobiDBLite
mobidb-lite
31 50 20 – –
PANTHER
PTHR11130
50 550 501 2.20E-285
IPR005615
PANTHER
PTHR11130:SF2
50 550 501 2.20E-285 –
PIRSF
PIRSF001558
72 550 479 1.90E-220
IPR005615
Gene3D
G3DSA:3.30.1490.80
80 161 82 3.20E-20
IPR014049
SUPERFAMILY
SSF56059
81 278 198 3.06E-131 –
CDD
cd00228
81 550 470 0 –
Pfam
PF03917
88 549 462 4.70E-138
IPR005615
TIGRFAM
TIGR01986
90 549 460 1.90E-183
IPR005615
Gene3D
G3DSA:1.10.1080.10
162 230 69 1.20E-32
IPR014042
Gene3D
G3DSA:3.40.50.1760
260 383 124 1.10E-46
IPR004887
SUPERFAMILY
SSF52440
281 384 104 9.78E-35
IPR016185
Pfam
PF03199
283 382 100 1.60E-32
IPR004887
SUPERFAMILY
SSF56059
382 550 169 3.06E-131 –
Gene3D
G3DSA:3.30.1490.50
418 481 64 2.70E-27
IPR014709

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004363
Molecular function Glutathione synthase activity Catalysis of the reaction: L-gamma-glutamyl-L-cysteine + ATP + glycine = ADP + glutathione + 2 H(+) + phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006750
Biological process Glutathione biosynthetic process The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.
Subterm of
GO:0016874
Molecular function Ligase activity Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj1g3v4955040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4955040.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.