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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4959910 |
| Transcript ID | Lj1g3v4959910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ammonium transporter 3 member 1-like [Glycine max] gi|356571182|ref|XP_003553758.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 483 | 483 | 0 | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 483 | 483 | 0 | ||
| Gene3D | 15 | 421 | 407 | 5.90E-113 | ||
| SUPERFAMILY | 16 | 421 | 406 | 1.07E-95 | ||
| TIGRFAM | 21 | 437 | 417 | 1.10E-104 | ||
| Phobius | 23 | 47 | 25 | – | – | |
| Pfam | 23 | 438 | 416 | 8.80E-80 | ||
| TMHMM | 26 | 48 | 23 | – | – | |
| Phobius | 48 | 58 | 11 | – | – | |
| TMHMM | 53 | 75 | 23 | – | – | |
| Phobius | 59 | 81 | 23 | – | – | |
| Phobius | 82 | 114 | 33 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 115 | 134 | 20 | – | – | |
| PRINTS | 118 | 134 | 17 | 3.70E-06 | ||
| Phobius | 135 | 140 | 6 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| Phobius | 141 | 162 | 22 | – | – | |
| Phobius | 163 | 176 | 14 | – | – | |
| TMHMM | 173 | 195 | 23 | – | – | |
| ProSitePatterns | 175 | 200 | 26 | – | ||
| Phobius | 177 | 198 | 22 | – | – | |
| Phobius | 199 | 209 | 11 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 210 | 230 | 21 | – | – | |
| PRINTS | 214 | 232 | 19 | 3.70E-06 | ||
| Phobius | 231 | 235 | 5 | – | – | |
| Phobius | 236 | 263 | 28 | – | – | |
| TMHMM | 240 | 262 | 23 | – | – | |
| PRINTS | 245 | 267 | 23 | 3.70E-06 | ||
| Phobius | 264 | 283 | 20 | – | – | |
| TMHMM | 283 | 305 | 23 | – | – | |
| Phobius | 284 | 312 | 29 | – | – | |
| PRINTS | 300 | 318 | 19 | 3.70E-06 | ||
| Phobius | 313 | 331 | 19 | – | – | |
| TMHMM | 331 | 353 | 23 | – | – | |
| Phobius | 332 | 353 | 22 | – | – | |
| Phobius | 354 | 391 | 38 | – | – | |
| Phobius | 392 | 417 | 26 | – | – | |
| TMHMM | 395 | 417 | 23 | – | – | |
| Phobius | 418 | 483 | 66 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of Lj1g3v4959910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4959910.1, powered by CORGI.
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