Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v5020760.1

Overview

Field Value
Gene ID Lj1g3v5020760
Transcript ID Lj1g3v5020760.1
Lotus japonicus genome version MG20 v3.0
Description Receptor-like protein kinase [Medicago truncatula] gi|357493485|ref|XP_003617031.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP 1 27 27
Phobius 1 8 8
Phobius 1 27 27
PANTHER 1 143 143 1.40E-48
PANTHER 1 143 143 1.40E-48
Phobius 9 19 11
TMHMM 10 32 23
Phobius 20 27 8
Phobius 28 150 123
Pfam 32 84 53 6.60E-10
SUPERFAMILY 48 129 82 1.97E-07
Gene3D 50 129 80 3.50E-10

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj1g3v5020760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v5020760.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.