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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013210
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 576 results. Now displaying 1 of 12 with 50 rows per page. This search has taken 5.909s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
2 domain predictions
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Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
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Lj3g3v3375770.1
LjHar1 hypernodulation aberrant root formation protein [Lotus japonicus] gi|24940156|emb|CAD42335.1| chr3 41520393 41525499 +
2 domain predictions
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Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
2 domain predictions
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Lj0g3v0019189.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7588157 7590806 +
2 domain predictions
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Lj0g3v0019209.1
n.a. PREDICTED: probable inactive receptor kinase RLK902-like [Cicer arietinum] gi|502163215|ref|XP_004512763.1| chr0 7596646 7599369 -
2 domain predictions
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Lj0g3v0020169.1
n.a. PREDICTED: receptor-like protein 12-like [Cicer arietinum] gi|502147282|ref|XP_004506724.1| chr0 8075083 8078449 +
2 domain predictions
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Lj0g3v0020179.1
n.a. n.a. chr0 8075083 8089893 -
2 domain predictions
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Lj0g3v0022029.1
n.a. Kinase-like protein [Medicago truncatula] gi|357491853|ref|XP_003616214.1| chr0 8901816 8902952 +
2 domain predictions
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Lj0g3v0042849.1
n.a. Kinase-like protein [Medicago truncatula] gi|357484475|ref|XP_003612525.1| chr0 14081007 14083549 +
2 domain predictions
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Lj0g3v0043799.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356541594|ref|XP_003539259.1| chr0 14384170 14387274 -
2 domain predictions
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Lj0g3v0045329.1
n.a. PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2-like [Cicer arietinum] gi|502114811|ref|XP_004495057.1| chr0 14905769 14908489 +
2 domain predictions
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Lj0g3v0050299.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710-like [Glycine max] gi|356527105|ref|XP_003532154.1| chr0 17090362 17095739 +
2 domain predictions
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Lj0g3v0055039.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502097475|ref|XP_004491002.1| chr0 17639362 17641296 +
2 domain predictions
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Lj0g3v0065639.2
n.a. PREDICTED: somatic embryogenesis receptor kinase 1-like [Glycine max] gi|356576127|ref|XP_003556185.1| chr0 22860880 22867426 -
2 domain predictions
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Lj0g3v0066349.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Cicer arietinum] gi|502134366|ref|XP_004502093.1| chr0 23322310 23323491 +
2 domain predictions
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Lj0g3v0067549.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
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Lj0g3v0067549.2
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 1-like [Glycine max] gi|356516754|ref|XP_003527058.1| chr0 23998624 24003883 -
2 domain predictions
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Lj0g3v0073579.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform X1 [Cicer arietinum] gi|502096414|ref|XP_004490730.1| chr0 27615994 27623359 +
2 domain predictions
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Lj0g3v0073579.3
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like [Glycine max] gi|356551958|ref|XP_003544339.1| chr0 27615994 27623359 +
2 domain predictions
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Lj0g3v0086719.1
n.a. PREDICTED: somatic embryogenesis receptor kinase 4-like [Glycine max] gi|356559929|ref|XP_003548248.1| chr0 35046088 35050220 -
2 domain predictions
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Lj0g3v0090439.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 37254703 37257214 -
2 domain predictions
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Lj0g3v0094389.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At1g50610-like [Cicer arietinum] gi|502089636|ref|XP_004488972.1| chr0 39688550 39691233 +
2 domain predictions
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Lj0g3v0100639.1
n.a. n.a. chr0 42535737 42541606 -
2 domain predictions
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Lj0g3v0100639.2
n.a. n.a. chr0 42535737 42541606 -
2 domain predictions
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Lj0g3v0106439.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770-like [Glycine max] gi|356559110|ref|XP_003547844.1| chr0 45774831 45781977 -
2 domain predictions
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Lj0g3v0108759.1
n.a. Kinase-like protein [Medicago truncatula] gi|357521441|ref|XP_003631009.1| chr0 47065607 47067858 +
2 domain predictions
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Lj0g3v0114919.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356503054|ref|XP_003520327.1| chr0 50450689 50453761 +
2 domain predictions
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Lj0g3v0115709.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356537708|ref|XP_003537367.1| chr0 50859370 50863385 +
2 domain predictions
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Lj0g3v0134889.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357493297|ref|XP_003616937.1| chr0 61907973 61912446 +
2 domain predictions
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Lj0g3v0161519.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356499089|ref|XP_003518376.1| chr0 75992903 75996790 -
2 domain predictions
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Lj0g3v0173409.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356552384|ref|XP_003544548.1| chr0 83385336 83391158 -
2 domain predictions
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Lj0g3v0187619.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| chr0 91504417 91506133 -
2 domain predictions
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Lj0g3v0195259.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502112140|ref|XP_004494248.1| chr0 95277361 95279611 -
2 domain predictions
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Lj0g3v0196359.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357462845|ref|XP_003601704.1| chr0 95739325 95740611 -
2 domain predictions
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Lj0g3v0203199.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357439013|ref|XP_003589783.1| chr0 100705047 100707368 +
2 domain predictions
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Lj0g3v0204149.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840-like isoform X1 [Cicer arietinum] gi|502129682|ref|XP_004500393.1| chr0 101251110 101253281 -
2 domain predictions
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Lj0g3v0205949.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 102542288 102543508 +
2 domain predictions
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Lj0g3v0220159.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635233 112639990 -
2 domain predictions
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Lj0g3v0235609.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Glycine max] gi|356561480|ref|XP_003549009.1| chr0 122105042 122106846 -
2 domain predictions
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Lj0g3v0243349.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like [Glycine max] gi|356497611|ref|XP_003517653.1| chr0 126210556 126215918 -
2 domain predictions
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Lj0g3v0247179.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128097658 128101088 -
2 domain predictions
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Lj0g3v0247209.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 128106771 128107410 -
2 domain predictions
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Lj0g3v0247829.1
n.a. Polygalacturonase inhibitor [Medicago truncatula] gi|357509859|ref|XP_003625218.1| chr0 128477084 128478271 -
2 domain predictions
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Lj0g3v0250789.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357436695|ref|XP_003588623.1| chr0 130005562 130006239 -
2 domain predictions
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Lj0g3v0257499.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356521171|ref|XP_003529231.1| chr0 133666414 133670992 -
2 domain predictions
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Lj0g3v0266899.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170-like [Cicer arietinum] gi|502166974|ref|XP_004514026.1| chr0 138286275 138293398 +
2 domain predictions
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Lj0g3v0271049.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357462393|ref|XP_003601478.1| chr0 140382825 140387367 +
2 domain predictions
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Lj0g3v0271059.1
n.a. Receptor protein kinase-like protein [Medicago truncatula] gi|357462393|ref|XP_003601478.1| chr0 140382825 140387369 +
2 domain predictions
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Lj0g3v0278349.1
n.a. probable leucine-rich repeat receptor-like protein kinase At1g35710-like precursor [Glycine max] gi|359807163|ref|NP_001241099.1| chr0 144542642 144544812 -
2 domain predictions
 –