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| Field | Value |
|---|---|
| Gene ID | Lj1g3v5020850 |
| Transcript ID | Lj1g3v5020850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: translational activator GCN1-like [Cicer arietinum] gi|502113779|ref|XP_004494756.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 2630 | 2630 | 0 | ||
| PANTHER | 1 | 2630 | 2630 | 0 | ||
| SUPERFAMILY | 28 | 613 | 586 | 1.28E-17 | ||
| Gene3D | 196 | 597 | 402 | 4.60E-76 | ||
| SUPERFAMILY | 677 | 737 | 61 | 1.28E-17 | ||
| Gene3D | 696 | 730 | 35 | 4.60E-76 | ||
| MobiDBLite | 792 | 840 | 49 | – | – | |
| Gene3D | 835 | 924 | 90 | 4.60E-76 | ||
| SUPERFAMILY | 868 | 950 | 83 | 1.73E-12 | ||
| Gene3D | 1045 | 1267 | 223 | 4.60E-76 | ||
| SUPERFAMILY | 1058 | 1296 | 239 | 1.73E-12 | ||
| SUPERFAMILY | 1278 | 2033 | 756 | 2.22E-100 | ||
| SMART | 1329 | 1565 | 237 | 4.90E-11 | – | |
| Gene3D | 1402 | 2201 | 800 | 2.10E-164 | ||
| ProSiteProfiles | 1622 | 1660 | 39 | 11.192 | ||
| SMART | 1647 | 1905 | 259 | 0.027 | – | |
| SUPERFAMILY | 1859 | 2187 | 329 | 1.11E-65 | ||
| SMART | 1913 | 2136 | 224 | 0.024 | – | |
| SUPERFAMILY | 2221 | 2424 | 204 | 1.11E-65 | ||
| Gene3D | 2230 | 2588 | 359 | 7.50E-45 | ||
| SUPERFAMILY | 2349 | 2587 | 239 | 6.04E-28 | ||
| CDD | 2356 | 2446 | 91 | 0.001332 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of translation | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA. | ||
| Molecular function | Protein kinase regulator activity | Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein. | ||
| Molecular function | Protein kinase binding | Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate. | ||
| Biological process | Positive regulation of kinase activity | Any process that activates or increases the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Molecular function | Ribosome binding | Interacting selectively and non-covalently with any part of a ribosome. |
Expression pattern of Lj1g3v5020850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v5020850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.