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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0635520 |
| Transcript ID | Lj2g3v0635520.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc finger protein JACKDAW-like [Cicer arietinum] gi|502164922|ref|XP_004513329.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 211 | 211 | 5.90E-178 | – | |
| MobiDBLite | 1 | 46 | 46 | – | – | |
| PANTHER | 1 | 211 | 211 | 5.90E-178 | – | |
| SUPERFAMILY | 57 | 83 | 27 | 4.35E-05 | – | |
| Gene3D | 59 | 82 | 24 | 1.70E-05 | ||
| SMART | 60 | 82 | 23 | 0.0052 | ||
| ProSiteProfiles | 60 | 82 | 23 | 10.97 | ||
| Pfam | 60 | 78 | 19 | 0.017 | – | |
| ProSitePatterns | 62 | 82 | 21 | – | ||
| ProSitePatterns | 62 | 142 | 81 | – | ||
| SMART | 101 | 131 | 31 | 190 | ||
| Gene3D | 128 | 158 | 31 | 6.10E-04 | ||
| SMART | 137 | 164 | 28 | 100 | ||
| MobiDBLite | 192 | 263 | 72 | – | – | |
| PANTHER | 232 | 300 | 69 | 5.90E-178 | – | |
| PANTHER | 232 | 300 | 69 | 5.90E-178 | – | |
| MobiDBLite | 304 | 351 | 48 | – | – | |
| Coils | 366 | 421 | 56 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj2g3v0635520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0635520.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.