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PF12874

Source: Pfam

Description

Zinc-finger of C2H2 type

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 47

Transcript Name Description Predicted domains Domain count
Lj0g3v0010209.1
– Uncharacterized protein TCM_037031 [Theobroma cacao] gi|508782264|gb|EOY29520.1|
Domains
3
Lj0g3v0085159.1
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
4
Lj0g3v0085159.2
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
4
Lj0g3v0199689.1
– Uncharacterized protein TCM_005599 [Theobroma cacao] gi|508704432|gb|EOX96328.1|
Domains
9
Lj0g3v0199689.2
– Uncharacterized protein TCM_005599 [Theobroma cacao] gi|508704432|gb|EOX96328.1|
Domains
15
Lj1g3v3006710.1
– PREDICTED: zinc finger RNA-binding protein-like [Cicer arietinum] gi|502126918|ref|XP_004499491.1|
Domains
11
Lj1g3v3006720.1
– PREDICTED: zinc finger RNA-binding protein-like [Cicer arietinum] gi|502126918|ref|XP_004499491.1|
Domains
9
Lj1g3v3254660.1
– Uncharacterized protein TCM_019327 [Theobroma cacao] gi|508712167|gb|EOY04064.1|
Domains
5
Lj1g3v4789540.1
– C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma cacao] gi|508719731|gb|EOY11628.1|
Domains
7
Lj2g3v0635520.1
– PREDICTED: zinc finger protein JACKDAW-like [Cicer arietinum] gi|502164922|ref|XP_004513329.1|
Domains
15
Lj2g3v1168860.1
– Zinc finger-like protein [Medicago truncatula] gi|357488357|ref|XP_003614466.1|
Domains
12
Lj3g3v0642600.1
– PREDICTED: splicing factor 3A subunit 2-like [Cicer arietinum] gi|502155744|ref|XP_004510177.1|
Domains
12
Lj4g3v0386210.1
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
14
Lj4g3v0386210.2
– HVA22-like protein a [Medicago truncatula] gi|357476187|ref|XP_003608379.1|
Domains
14
Lj4g3v0387230.1
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
14
Lj4g3v0387230.2
– HVA22-like protein a [Medicago truncatula] gi|357476187|ref|XP_003608379.1|
Domains
18
Lj4g3v0387230.3
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
18
Lj4g3v0388240.1
– HVA22-like protein a [Medicago truncatula] gi|357476187|ref|XP_003608379.1|
Domains
10
Lj4g3v1983680.1
– HVA22-like protein a [Medicago truncatula] gi|357476185|ref|XP_003608378.1|
Domains
8
Lj4g3v1984700.1
– Uncharacterized protein TCM_037031 [Theobroma cacao] gi|508782264|gb|EOY29520.1|
Domains
3
Lj4g3v1985730.1
– Uncharacterized protein TCM_037031 [Theobroma cacao] gi|508782264|gb|EOY29520.1|
Domains
4
Lj4g3v1985740.1
– Uncharacterized protein TCM_037031 [Theobroma cacao] gi|508782264|gb|EOY29520.1|
Domains
7
Lj4g3v2023780.1
– Zinc finger protein [Medicago truncatula] gi|357491925|ref|XP_003616250.1|
Domains
6
Lj4g3v2174020.1
– Zinc ion binding protein [Arabidopsis thaliana] gi|18399026|ref|NP_565451.1|
Domains
7
LotjaGi1g1v0135400.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|A0A0L9UXN1|A0A0L9UXN1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0135400
Domains
22
LotjaGi1g1v0190900.1
– Zinc finger protein; TAIR: AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346; TrEMBL-Plants: tr|A0A072UVJ5|A0A072UVJ5_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi1g1v0190900
Domains
11
LotjaGi1g1v0509600_LC.1
– Zinc finger protein; TAIR: AT3G29310.1 calmodulin-binding protein-like protein; Swiss-Prot: sp|Q9LIB3|BAG8_ARATH BAG family molecular chaperone regulator 8, chloroplastic; TrEMBL-Plants: tr|C6TD17|C6TD17_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0509600_LC
Domains
12
LotjaGi1g1v0509700.1
– Zinc finger protein; TAIR: AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B; TrEMBL-Plants: tr|V7B1Q0|V7B1Q0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0509700
Domains
11
LotjaGi2g1v0098100.1
– Zinc finger family protein; TAIR: AT1G34370.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1; TrEMBL-Plants: tr|S6BUC5|S6BUC5_LOTJA STOP1-like protein; Found in the gene: LotjaGi2g1v0098100
Domains
11
LotjaGi3g1v0075400.1
– Splicing factor 3A subunit 2; TAIR: AT2G32600.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q15428|SF3A2_HUMAN Splicing factor 3A subunit 2; TrEMBL-Plants: tr|I1MCD5|I1MCD5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0075400
Domains
13
LotjaGi3g1v0075400.2
– Splicing factor 3A subunit 2; TAIR: AT2G32600.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q15428|SF3A2_HUMAN Splicing factor 3A subunit 2; TrEMBL-Plants: tr|A0A1J7GPB1|A0A1J7GPB1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0075400
Domains
13
LotjaGi3g1v0205100.1
– Zinc finger protein; TAIR: AT5G61190.2 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c; TrEMBL-Plants: tr|V7AMM2|V7AMM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0205100
Domains
11
LotjaGi3g1v0205100.2
– Zinc finger protein; TAIR: AT5G61190.2 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein; Swiss-Prot: sp|O59811|REI1_SCHPO Cytoplasmic 60S subunit biogenesis factor SPCC550.15c; TrEMBL-Plants: tr|V7AMM2|V7AMM2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0205100
Domains
17
LotjaGi4g1v0040600.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|A0A151T2F4|A0A151T2F4_CAJCA HVA22-like protein; Found in the gene: LotjaGi4g1v0040600
Domains
21
LotjaGi4g1v0040700.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|I1KQX1|I1KQX1_SOYBN HVA22-like protein; Found in the gene: LotjaGi4g1v0040700
Domains
20
LotjaGi4g1v0040700.2
– HVA22-like protein; TAIR: AT1G69700.1 HVA22 homologue C; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|A0A151T2F4|A0A151T2F4_CAJCA HVA22-like protein; Found in the gene: LotjaGi4g1v0040700
Domains
20
LotjaGi4g1v0040800.1
– HVA22-like protein; TAIR: AT1G74520.1 HVA22 homologue A; Swiss-Prot: sp|Q9S7V4|HA22A_ARATH HVA22-like protein a; TrEMBL-Plants: tr|G7JV31|G7JV31_MEDTR TB2/DP1, HVA22 family protein; Found in the gene: LotjaGi4g1v0040800
Domains
18
LotjaGi4g1v0288800_LC.1
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
10
LotjaGi4g1v0288800_LC.2
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.3
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.4
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.5
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.6
– Zinc finger protein 385D; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q6AXX3|Z385D_RAT Zinc finger protein 385D; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
11
LotjaGi4g1v0288800_LC.7
– 30S ribosomal protein S3; TAIR: AT2G19380.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|O64571|UBA1C_ARATH UBP1-associated proteins 1C; TrEMBL-Plants: tr|A0A1J7J0K1|A0A1J7J0K1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288800_LC
Domains
12
LotjaGi4g1v0288900.1
– Zinc finger protein; TAIR: AT2G24030.1 zinc ion binding / nucleic acid binding protein; Swiss-Prot: sp|Q9UPR6|ZFR2_HUMAN Zinc finger RNA-binding protein 2; TrEMBL-Plants: tr|G7JFL6|G7JFL6_MEDTR C2H2 type zf-met: zinc-finger protein; Found in the gene: LotjaGi4g1v0288900
Domains
12
LotjaGi4g1v0294700.1
– Zinc finger protein 830; TAIR: AT3G02860.2 zinc ion binding protein; Swiss-Prot: sp|Q63ZM9|ZN830_XENLA Zinc finger protein 830; TrEMBL-Plants: tr|I3SVA5|I3SVA5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0294700
Domains
8
LotjaGi4g1v0328300.1
– Zinc finger RNA-binding protein; TAIR: AT2G19385.1 zinc ion binding protein; Swiss-Prot: sp|O64571|UBA1C_ARATH UBP1-associated proteins 1C; TrEMBL-Plants: tr|V7CCJ3|V7CCJ3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0328300
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.13