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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0741700 |
| Transcript ID | Lj2g3v0741700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: syntaxin-81-like [Cicer arietinum] gi|502163736|ref|XP_004512932.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 289 | 289 | – | – | |
| PANTHER | 2 | 309 | 308 | 5.20E-115 | – | |
| PANTHER | 2 | 309 | 308 | 5.20E-115 | – | |
| Pfam | 5 | 86 | 82 | 1.80E-16 | ||
| SUPERFAMILY | 56 | 273 | 218 | 1.65E-05 | ||
| Gene3D | 59 | 99 | 41 | 4.80E-04 | – | |
| Coils | 69 | 89 | 21 | – | – | |
| Coils | 94 | 114 | 21 | – | – | |
| Gene3D | 166 | 230 | 65 | 4.80E-04 | – | |
| MobiDBLite | 169 | 199 | 31 | – | – | |
| Gene3D | 231 | 303 | 73 | 1.20E-06 | – | |
| TMHMM | 289 | 308 | 20 | – | – | |
| Phobius | 290 | 308 | 19 | – | – | |
| Phobius | 309 | 309 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. |
Expression pattern of Lj2g3v0741700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0741700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.