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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0914190 |
| Transcript ID | Lj2g3v0914190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sodium transporter HKT1-like isoform X2 [Cicer arietinum] gi|502164287|ref|XP_004513110.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 21 | 42 | 22 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| PANTHER | 21 | 381 | 361 | 4.70E-122 | – | |
| Phobius | 43 | 61 | 19 | – | – | |
| Phobius | 62 | 78 | 17 | – | – | |
| Phobius | 79 | 89 | 11 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 90 | 111 | 22 | – | – | |
| Phobius | 112 | 183 | 72 | – | – | |
| Pfam | 171 | 381 | 211 | 1.80E-21 | ||
| TMHMM | 183 | 205 | 23 | – | – | |
| Phobius | 184 | 206 | 23 | – | – | |
| Phobius | 207 | 217 | 11 | – | – | |
| Phobius | 218 | 240 | 23 | – | – | |
| TMHMM | 220 | 239 | 20 | – | – | |
| Phobius | 241 | 251 | 11 | – | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 252 | 276 | 25 | – | – | |
| Phobius | 277 | 302 | 26 | – | – | |
| Phobius | 303 | 327 | 25 | – | – | |
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 328 | 362 | 35 | – | – | |
| Phobius | 363 | 380 | 18 | – | – | |
| Phobius | 381 | 381 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0914190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0914190.1, powered by CORGI.
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