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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0914260 |
| Transcript ID | Lj2g3v0914260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: probable cation transporter HKT6-like [Cicer arietinum] gi|502164358|ref|XP_004513135.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 316 | 316 | 4.00E-105 | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| Phobius | 14 | 37 | 24 | – | – | |
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 38 | 112 | 75 | – | – | |
| Pfam | 68 | 316 | 249 | 1.10E-20 | ||
| Phobius | 113 | 137 | 25 | – | – | |
| TMHMM | 114 | 136 | 23 | – | – | |
| Phobius | 138 | 156 | 19 | – | – | |
| Phobius | 157 | 175 | 19 | – | – | |
| Phobius | 176 | 186 | 11 | – | – | |
| Phobius | 187 | 210 | 24 | – | – | |
| TMHMM | 188 | 210 | 23 | – | – | |
| Phobius | 211 | 244 | 34 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 245 | 265 | 21 | – | – | |
| Phobius | 266 | 296 | 31 | – | – | |
| Phobius | 297 | 315 | 19 | – | – | |
| TMHMM | 297 | 314 | 18 | – | – | |
| Phobius | 316 | 316 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0914260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0914260.1, powered by CORGI.
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