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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0914290 |
| Transcript ID | Lj2g3v0914290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sodium transporter HKT1-like [Glycine max] gi|356545131|ref|XP_003540998.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 57 | 57 | – | – | |
| PANTHER | 18 | 530 | 513 | 3.10E-192 | – | |
| TMHMM | 50 | 72 | 23 | – | – | |
| Phobius | 58 | 76 | 19 | – | – | |
| Phobius | 77 | 117 | 41 | – | – | |
| Phobius | 118 | 140 | 23 | – | – | |
| TMHMM | 118 | 140 | 23 | – | – | |
| Phobius | 141 | 195 | 55 | – | – | |
| Pfam | 186 | 410 | 225 | 2.00E-25 | ||
| Phobius | 196 | 223 | 28 | – | – | |
| TMHMM | 201 | 223 | 23 | – | – | |
| Phobius | 224 | 234 | 11 | – | – | |
| Phobius | 235 | 255 | 21 | – | – | |
| Phobius | 256 | 266 | 11 | – | – | |
| Phobius | 267 | 285 | 19 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 286 | 319 | 34 | – | – | |
| Phobius | 320 | 344 | 25 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 345 | 379 | 35 | – | – | |
| Phobius | 380 | 402 | 23 | – | – | |
| TMHMM | 387 | 409 | 23 | – | – | |
| Phobius | 403 | 421 | 19 | – | – | |
| Phobius | 422 | 444 | 23 | – | – | |
| TMHMM | 422 | 444 | 23 | – | – | |
| Pfam | 423 | 520 | 98 | 1.70E-06 | ||
| Phobius | 445 | 545 | 101 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v0914290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0914290.1, powered by CORGI.
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