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Lj2g3v0914830.1

Overview

Field Value
Gene ID Lj2g3v0914830
Transcript ID Lj2g3v0914830.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max] gi|356523838|ref|XP_003530541.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257:SF541
19 389 371 7.70E-260 –
PANTHER
PTHR23257
19 389 371 7.70E-260 –
Gene3D
G3DSA:3.30.200.20
106 197 92 2.40E-26 –
SUPERFAMILY
SSF56112
115 385 271 1.48E-81
IPR011009
SMART
SM00220
131 385 255 2.00E-58
IPR000719
ProSiteProfiles
PS50011
131 389 259 43.58
IPR000719
Pfam
PF07714
132 385 254 2.00E-66
IPR001245
CDD
cd13999
138 385 248 6.81E-126 –
Gene3D
G3DSA:1.10.510.10
198 384 187 7.80E-58 –
PRINTS
PR00109
209 222 14 5.50E-17
IPR001245
PRINTS
PR00109
247 265 19 5.50E-17
IPR001245
ProSitePatterns
PS00108
253 265 13 –
IPR008271
PRINTS
PR00109
293 303 11 5.50E-17
IPR001245
PRINTS
PR00109
312 334 23 5.50E-17
IPR001245
PRINTS
PR00109
356 378 23 5.50E-17
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj2g3v0914830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0914830.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.