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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0921560 |
| Transcript ID | Lj2g3v0921560.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: golgin candidate 6-like [Cicer arietinum] gi|502090365|ref|XP_004489204.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 148 | 148 | 4.20E-97 | ||
| Phobius | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 50 | 50 | – | – | |
| Phobius | 31 | 42 | 12 | – | – | |
| Pfam | 31 | 192 | 162 | 7.00E-17 | ||
| Phobius | 43 | 50 | 8 | – | – | |
| Phobius | 51 | 417 | 367 | – | – | |
| PANTHER | 172 | 417 | 246 | 4.20E-97 | ||
| Coils | 272 | 341 | 70 | – | – | |
| Pfam | 292 | 416 | 125 | 3.40E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Biological process | Vesicle fusion with Golgi apparatus | The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi. |
Expression pattern of Lj2g3v0921560.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0921560.2, powered by CORGI.
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