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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0932700 |
| Transcript ID | Lj2g3v0932700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nuclear pore membrane glycoprotein 210-like [Cicer arietinum] gi|502090450|ref|XP_004489232.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| PANTHER | 3 | 681 | 679 | 0 | – | |
| PANTHER | 3 | 681 | 679 | 0 | – | |
| Phobius | 5 | 18 | 14 | – | – | |
| Phobius | 19 | 26 | 8 | – | – | |
| Phobius | 27 | 1864 | 1838 | – | – | |
| SMART | 472 | 548 | 77 | 3.40E-06 | ||
| Pfam | 490 | 536 | 47 | 1.50E-06 | ||
| Gene3D | 500 | 550 | 51 | 6.90E-10 | – | |
| SUPERFAMILY | 500 | 550 | 51 | 1.10E-09 | ||
| PANTHER | 703 | 1950 | 1248 | 0 | – | |
| PANTHER | 703 | 1950 | 1248 | 0 | – | |
| SMART | 1144 | 1222 | 79 | 0.063 | ||
| Pfam | 1150 | 1208 | 59 | 2.60E-05 | ||
| SMART | 1556 | 1644 | 89 | 0.051 | ||
| TMHMM | 1865 | 1887 | 23 | – | – | |
| Phobius | 1865 | 1887 | 23 | – | – | |
| Phobius | 1888 | 1957 | 70 | – | – | |
| MobiDBLite | 1896 | 1931 | 36 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj2g3v0932700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0932700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.