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Lj2g3v0934140.1

Overview

Field Value
Gene ID Lj2g3v0934140
Transcript ID Lj2g3v0934140.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: mitogen-activated protein kinase kinase 6-like [Glycine max] gi|356511672|ref|XP_003524547.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24361
42 419 378 1.60E-164 –
PANTHER
PTHR24361:SF408
42 419 378 1.60E-164 –
SMART
SM00220
91 347 257 2.20E-78
IPR000719
ProSiteProfiles
PS50011
91 347 257 45.149
IPR000719
CDD
cd06623
92 351 260 1.28E-144 –
Gene3D
G3DSA:3.30.200.20
93 179 87 1.60E-15 –
SUPERFAMILY
SSF56112
93 409 317 4.45E-73
IPR011009
Pfam
PF00069
95 347 253 4.40E-59
IPR000719
ProSitePatterns
PS00107
97 120 24 –
IPR017441
Gene3D
G3DSA:1.10.510.10
180 352 173 1.40E-55 –
ProSitePatterns
PS00108
211 223 13 –
IPR008271
Gene3D
G3DSA:3.10.450.50
371 520 150 1.70E-07
IPR032710
SUPERFAMILY
SSF54427
372 470 99 3.73E-12
IPR032710
ProSiteProfiles
PS50177
374 524 151 17.477
IPR018222
SUPERFAMILY
SSF54427
497 524 28 3.73E-12
IPR032710

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj2g3v0934140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0934140.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.