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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1014480 |
| Transcript ID | Lj2g3v1014480.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc transporter 3-like [Cicer arietinum] gi|502090664|ref|XP_004489301.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 10 | 19 | 10 | – | – | |
| Phobius | 20 | 26 | 7 | – | – | |
| Phobius | 27 | 49 | 23 | – | – | |
| PANTHER | 27 | 344 | 318 | 1.00E-166 | – | |
| PANTHER | 27 | 344 | 318 | 1.00E-166 | – | |
| TIGRFAM | 30 | 344 | 315 | 5.30E-116 | ||
| Pfam | 46 | 342 | 297 | 5.10E-63 | ||
| TMHMM | 49 | 71 | 23 | – | – | |
| Phobius | 50 | 69 | 20 | – | – | |
| Phobius | 70 | 80 | 11 | – | – | |
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 81 | 100 | 20 | – | – | |
| Phobius | 101 | 119 | 19 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 120 | 141 | 22 | – | – | |
| Phobius | 142 | 251 | 110 | – | – | |
| Phobius | 252 | 273 | 22 | – | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 274 | 284 | 11 | – | – | |
| TMHMM | 284 | 305 | 22 | – | – | |
| Phobius | 285 | 309 | 25 | – | – | |
| Phobius | 310 | 320 | 11 | – | – | |
| Phobius | 321 | 344 | 24 | – | – | |
| TMHMM | 325 | 344 | 20 | – | – | |
| Phobius | 345 | 345 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion transmembrane transporter activity | Enables the transfer of zinc (Zn) ions from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. | ||
| Biological process | Zinc ion transmembrane transport | A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj2g3v1014480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1014480.1, powered by CORGI.
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