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Lj2g3v1015600.1

Overview

Field Value
Gene ID Lj2g3v1015600
Transcript ID Lj2g3v1015600.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: potassium transporter 8-like isoform X1 [Cicer arietinum] gi|502090667|ref|XP_004489302.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 775 775 0
PANTHER 1 775 775 0
Phobius 1 19 19
TMHMM 20 42 23
Phobius 20 40 21
TIGRFAM 23 775 753 1.10E-255
Pfam 25 605 581 5.90E-194
Phobius 41 59 19
Phobius 60 81 22
TMHMM 62 84 23
Phobius 82 152 71
Phobius 153 178 26
TMHMM 153 175 23
Phobius 179 197 19
TMHMM 195 214 20
Phobius 198 215 18
Phobius 216 221 6
TMHMM 221 243 23
Phobius 222 243 22
Phobius 244 267 24
TMHMM 266 288 23
Phobius 268 288 21
Phobius 289 299 11
Phobius 300 320 21
TMHMM 300 322 23
Phobius 321 346 26
Phobius 347 370 24
TMHMM 348 370 23
Phobius 371 390 20
Phobius 391 413 23
TMHMM 391 413 23
Phobius 414 424 11
TMHMM 424 446 23
Phobius 425 446 22
Phobius 447 452 6
TMHMM 453 475 23
Phobius 453 475 23
Phobius 476 480 5
TMHMM 480 502 23
Phobius 481 498 18
Phobius 499 775 277
TMHMM 514 531 18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj2g3v1015600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v1015600.1, powered by CORGI.

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