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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1022220 |
| Transcript ID | Lj2g3v1022220.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g14940-like [Glycine max] gi|356571955|ref|XP_003554136.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 58 | 58 | – | – | |
| PANTHER | 19 | 539 | 521 | 0 | – | |
| PANTHER | 19 | 539 | 521 | 0 | ||
| Gene3D | 21 | 232 | 212 | 6.40E-12 | – | |
| SUPERFAMILY | 22 | 230 | 209 | 5.36E-20 | ||
| TMHMM | 56 | 78 | 23 | – | – | |
| Phobius | 59 | 78 | 20 | – | – | |
| Phobius | 79 | 83 | 5 | – | – | |
| Pfam | 81 | 488 | 408 | 6.20E-82 | ||
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 84 | 104 | 21 | – | – | |
| Phobius | 105 | 168 | 64 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 169 | 188 | 20 | – | – | |
| Phobius | 189 | 193 | 5 | – | – | |
| Phobius | 194 | 221 | 28 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Phobius | 222 | 295 | 74 | – | – | |
| Gene3D | 283 | 529 | 247 | 3.60E-06 | – | |
| SUPERFAMILY | 288 | 531 | 244 | 5.36E-20 | ||
| Phobius | 296 | 317 | 22 | – | – | |
| TMHMM | 298 | 320 | 23 | – | – | |
| Phobius | 318 | 336 | 19 | – | – | |
| Phobius | 337 | 357 | 21 | – | – | |
| TMHMM | 340 | 362 | 23 | – | – | |
| Phobius | 358 | 376 | 19 | – | – | |
| Phobius | 377 | 398 | 22 | – | – | |
| TMHMM | 382 | 401 | 20 | – | – | |
| Phobius | 399 | 429 | 31 | – | – | |
| TMHMM | 421 | 443 | 23 | – | – | |
| Phobius | 430 | 449 | 20 | – | – | |
| Phobius | 450 | 460 | 11 | – | – | |
| Phobius | 461 | 486 | 26 | – | – | |
| TMHMM | 464 | 486 | 23 | – | – | |
| Phobius | 487 | 505 | 19 | – | – | |
| Phobius | 506 | 525 | 20 | – | – | |
| TMHMM | 506 | 525 | 20 | – | – | |
| Phobius | 526 | 539 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1022220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1022220.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.