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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1022220 |
| Transcript ID | Lj2g3v1022220.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At5g14940-like [Glycine max] gi|356571955|ref|XP_003554136.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | – | – | |
| PANTHER | 3 | 533 | 531 | 0 | ||
| PANTHER | 3 | 533 | 531 | 0 | – | |
| SUPERFAMILY | 10 | 225 | 216 | 9.94E-21 | ||
| Gene3D | 10 | 226 | 217 | 1.20E-12 | – | |
| TMHMM | 50 | 72 | 23 | – | – | |
| Phobius | 53 | 72 | 20 | – | – | |
| Phobius | 73 | 77 | 5 | – | – | |
| Pfam | 75 | 482 | 408 | 5.90E-82 | ||
| TMHMM | 76 | 98 | 23 | – | – | |
| Phobius | 78 | 98 | 21 | – | – | |
| Phobius | 99 | 162 | 64 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 163 | 182 | 20 | – | – | |
| Phobius | 183 | 187 | 5 | – | – | |
| Phobius | 188 | 215 | 28 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 216 | 289 | 74 | – | – | |
| Gene3D | 277 | 523 | 247 | 3.50E-06 | – | |
| SUPERFAMILY | 281 | 525 | 245 | 9.94E-21 | ||
| Phobius | 290 | 311 | 22 | – | – | |
| TMHMM | 292 | 314 | 23 | – | – | |
| Phobius | 312 | 330 | 19 | – | – | |
| Phobius | 331 | 351 | 21 | – | – | |
| TMHMM | 334 | 356 | 23 | – | – | |
| Phobius | 352 | 370 | 19 | – | – | |
| Phobius | 371 | 392 | 22 | – | – | |
| TMHMM | 376 | 395 | 20 | – | – | |
| Phobius | 393 | 423 | 31 | – | – | |
| TMHMM | 415 | 437 | 23 | – | – | |
| Phobius | 424 | 443 | 20 | – | – | |
| Phobius | 444 | 454 | 11 | – | – | |
| Phobius | 455 | 480 | 26 | – | – | |
| TMHMM | 458 | 480 | 23 | – | – | |
| Phobius | 481 | 499 | 19 | – | – | |
| Phobius | 500 | 519 | 20 | – | – | |
| TMHMM | 500 | 519 | 20 | – | – | |
| Phobius | 520 | 533 | 14 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj2g3v1022220.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1022220.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.